| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1402 |
|---|
| Symbol | |
|---|
| ID | 4623817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1721911 |
|---|
| End bp | 1722525 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639796608 |
|---|
| Product | fumarylacetoacetate (FAA) hydrolase |
|---|
| Protein accession | YP_942818 |
|---|
| Protein GI | 119945138 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA TAAAGATTGA TGGAAAATCA TTTTGTCCTT CTAAAGTGGT CTGTATTGGA
CGTAATTATG TTGATCATAT TAAAGAGTTA AACAATGAGA TGCCAACACA AGCGGTTATT
TTTGTTAAAC CTAATTCCGC TATTTCTGAG CGAATAGTCA GTAATGACAT TGAACCCATT
CATTATGAAG CTGAAATTTC ATTTGTTATC AATGCAGGGG TGATAAGTGC AGTGGGTTTT
GGCTTAGATC TGACTAAACG CGCTTTACAA TCAAGATTAA AAGCGCAGAG TTTACCCTGG
GAACGTGCAA AAGCCTTTGA TAAGTCAGCG GTATTTAGTG AATTTGTCAG TTTTAGCGGT
GCCGTGCAAA CCTTGTCGCT GCAGTTATTA ATCAATGACA AATTAACTCA ACATGCACAT
TACGATTTAA TGATTCATAA ACCCGCCGCA ATCATCTCTG AAGTCAGCGG GTTTATGAGT
TTTGAAGCGG GTGATGTGCT GATGACGGGC ACCCCTAAAG GCGTGGGAGA ATTATTTGAA
AATGATCATT TTATCGGGCG CATTTTTCAG GGCGATACTC TGTTGATTGA ACAACATTGG
ATAGTTGAAG GCTAA
|
|---|
| Protein sequence | MKQIKIDGKS FCPSKVVCIG RNYVDHIKEL NNEMPTQAVI FVKPNSAISE RIVSNDIEPI
HYEAEISFVI NAGVISAVGF GLDLTKRALQ SRLKAQSLPW ERAKAFDKSA VFSEFVSFSG
AVQTLSLQLL INDKLTQHAH YDLMIHKPAA IISEVSGFMS FEAGDVLMTG TPKGVGELFE
NDHFIGRIFQ GDTLLIEQHW IVEG
|
|---|
| |