Gene Ping_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1350 
Symbol 
ID4624519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1669332 
End bp1670114 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content44% 
IMG OID639796563 
Productpeptidase M56, BlaR1 
Protein accessionYP_942773 
Protein GI119945093 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.205977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCCA TAATAGTCAC TGTGCCCGCT TTAAATCACG ACTCCTTACT GCCCATAGAT 
CATTGTCATG CTGCCAGCGC CTGTTTTGGT GCACCTACTT CTCATATGGT TACCTTGGTT
GAATTATTGA TAGCAGGGGC TATTGTCGGC CTTTTTTTAT GGGCTTGTAT ATCAGCTTTG
AGATACTTCC AGCGCGCTCA AAAACTATTT AAGCGCCTAG ATCTGGTGTC AGAAGTGGGC
CCTGAATCAA ACGTTAAGAT CATCGAGAGT CCCGTACCCT TGGCTTTTTC TCTTGGTATC
TTTAAGCCTA TCACGGTGCT CTCAACCGGA CTCAAAAATC AGCTCTCGCC CCGGCAGGTG
CGAATAGTGT CGATACATGA AGAAGTACAT ACGAAATATC GGGATGGCTT GTCTAAATTG
CTAATGCAAG CAATATGTAC CTTCCATTTT ACTTCTGCCC AAAAATATAT TCTGGAGCAA
CACGCTCTGG TATTAGAGAT GAGGGCTGAT CAACTTGCAG CCCAAATTAT TCAATCTAAC
CTGGATGTTG CAGAGACTAT TTTGACAGTA AAAAAATTGA TGAGTCCCGA GGCTCAAACC
GAGCCATTGT GCCAGTTTTT AGCTTCAGAG TTAGAGCAAA GAGTACATTA TTTGTTAGCG
CCTGTGCCTG AAAAATCCTT ATGCCCAAAA ACGATTAAAC TGGCCGTACT GACTCTGATA
ATCACAGCGG TTTGTGCTTC TGTCCCCCTT CACAATGCCA TTGAATTCTT CATTACTCTA
TAG
 
Protein sequence
MLSIIVTVPA LNHDSLLPID HCHAASACFG APTSHMVTLV ELLIAGAIVG LFLWACISAL 
RYFQRAQKLF KRLDLVSEVG PESNVKIIES PVPLAFSLGI FKPITVLSTG LKNQLSPRQV
RIVSIHEEVH TKYRDGLSKL LMQAICTFHF TSAQKYILEQ HALVLEMRAD QLAAQIIQSN
LDVAETILTV KKLMSPEAQT EPLCQFLASE LEQRVHYLLA PVPEKSLCPK TIKLAVLTLI
ITAVCASVPL HNAIEFFITL