Gene Ping_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1338 
Symbol 
ID4624507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1658439 
End bp1659776 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content41% 
IMG OID639796552 
Productproton/glutamate symporter 
Protein accessionYP_942762 
Protein GI119945082 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAA AAAAACAAAA AATGTCACTC ACTAAACGTG TTCTACTTGG TATGCTTATT 
GGCATCATAA CGGGTTTTTT AATCCGTACA TTTTTACCTG ACAACGCATT TGTTAATGAA
TATATTGTGA ATGGATTCTT TGAAGTGGGC GGAAAAATAT TCATCGCCAG CTTGAAGATG
TTAGTCGTAC CGCTTATTTT TGTCTCATTA GTCTGCGGAA CCAGTTCATT AAAAGATATT
TCAACCCTGG GGCGTTTGGG CGGGAAAACC ATCGCCTTTT ATCTGATGAC TACAGCGATT
GCTATTACCT TTGCAATCAT TATGGGTAAT ATTTTTGAAC CGGGTGTTGG GACTGACCTT
TCTACCGCAA CAACTTACGC ATCGTCAGAA GCGCCTTCAT TAGCCTCTGT TATTATTAAC
ATGTTCCCTA CCAATCCCGT TAACGCTATG GCCGAGGGCA ACACCTTACA AATTATTGTG
TTTGCCATTT TATTTGGTAT CGCTGTCAGT GCTTCCGGAC AATCTGGTGC ACGCATCGCA
GCCTTTTTTG TTGATCTTAA TGAAGTGATT ATGAAGCTGG TGGTAATGTT AATGAATATT
GCACCCTACG GTGTGTTTTT CTTAATGGCT AAATTATTTA CGGAAATCGG ATTAGATGCG
ATTAGCAATT TATTAAGTTA TTTTTTAGTG CTATCTGCCA CTTTGTTACT GCATGGTTTA
ATCACTTACG GTATTTGTTT TAAAGTCTTT ACCGGTCTTA ATCCCATTAC CTTTTTAAAG
AAAATGGAAA CGGCCATCAC CTTTGCTTTT TCAACGGCAT CATCAAATGC AACCATTCCT
GTCACGCTTG AAACCGCGAC TAAGCATCTC GGTATTTCAA ATAAAGTGGC CTCCTTTACG
GTGCCGCTGG GCGCTACCAT CAATATGGAT GGTACTGCCA TTATGCAGGG GGTTGCGACG
GTATTTATCG CACAAGCCTT TAATATTGAT TTGTCTTTAG CTGACTACGG TGCGGTAATA
CTCACTGCAA CACTTGCATC CGTTGGCACA GCCGGGGTGC CCGGTGTTGG ACTGATCATG
CTGGCCATGG TACTTAATCA AGTGGGTCTG CCGGTTGAAG GGATCGCCAT TATTATGGGT
GTCGACAGAT TGTTAGATAT GATCCGTACC GCGGTTAATA TCACGGGCGA CTGTGTTGTT
ACTTGTATTG TCGCTAAATC CGAAGGTGAA ATGAATATTG ATGTATTTAA TGATCCTAAG
GCGGGTGATA AAGACGAAGA ATTACGTCTT CATAAATTAG GGTTAGAAGC TGAAGCTGAA
AGAGTCAGAA ACGCGTAA
 
Protein sequence
MTEKKQKMSL TKRVLLGMLI GIITGFLIRT FLPDNAFVNE YIVNGFFEVG GKIFIASLKM 
LVVPLIFVSL VCGTSSLKDI STLGRLGGKT IAFYLMTTAI AITFAIIMGN IFEPGVGTDL
STATTYASSE APSLASVIIN MFPTNPVNAM AEGNTLQIIV FAILFGIAVS ASGQSGARIA
AFFVDLNEVI MKLVVMLMNI APYGVFFLMA KLFTEIGLDA ISNLLSYFLV LSATLLLHGL
ITYGICFKVF TGLNPITFLK KMETAITFAF STASSNATIP VTLETATKHL GISNKVASFT
VPLGATINMD GTAIMQGVAT VFIAQAFNID LSLADYGAVI LTATLASVGT AGVPGVGLIM
LAMVLNQVGL PVEGIAIIMG VDRLLDMIRT AVNITGDCVV TCIVAKSEGE MNIDVFNDPK
AGDKDEELRL HKLGLEAEAE RVRNA