Gene Ping_1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1323 
Symbol 
ID4626436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1642580 
End bp1643056 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content42% 
IMG OID639796537 
Producttranscriptional regulator, BadM/Rrf2 family protein 
Protein accessionYP_942747 
Protein GI119945067 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000941019 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAA CTTCAAAAGG GCGATATGCA GTAACCGCCA TGATTGATGT CGCTATTAAA 
GAGCATACAG GCCCGGTGCC ATTAGCTGAC ATTTCGGCGC GTCAGGGAAT ATCCCTTTCC
TATCTTGAGC AGCTTTTCTC CAAATTACGC AAAAAAGAGT TGGTGAGCAG TGTTCGCGGT
CCAGGTGGTG GTTATAAACT GGGCAAAGAG CGTCATCAAA TCTCTGTAGC AATGATTATT
GATGCTGTTA ATGAGTCCGT AGACGTCAGA AAATGCGGCG GAAAAGGGGG CTGTGCAGAA
GATGGGGTAC AGTGTTTGAC ACACTCTTTG TGGGCTCAGC TGAGTGATCG CATCAGTACT
TTTTTAGATA ATATTACCCT TGAAGAGCTA ATGGTCTCTG ATCATGTACA GCATATTTCT
GGAATTCAAA ATAATAAATT TAACCAAACT GAAAAGCTAA ATGTTAAGTC ACACTAA
 
Protein sequence
MKLTSKGRYA VTAMIDVAIK EHTGPVPLAD ISARQGISLS YLEQLFSKLR KKELVSSVRG 
PGGGYKLGKE RHQISVAMII DAVNESVDVR KCGGKGGCAE DGVQCLTHSL WAQLSDRIST
FLDNITLEEL MVSDHVQHIS GIQNNKFNQT EKLNVKSH