Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1323 |
Symbol | |
ID | 4626436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1642580 |
End bp | 1643056 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639796537 |
Product | transcriptional regulator, BadM/Rrf2 family protein |
Protein accession | YP_942747 |
Protein GI | 119945067 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) [TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000941019 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAA CTTCAAAAGG GCGATATGCA GTAACCGCCA TGATTGATGT CGCTATTAAA GAGCATACAG GCCCGGTGCC ATTAGCTGAC ATTTCGGCGC GTCAGGGAAT ATCCCTTTCC TATCTTGAGC AGCTTTTCTC CAAATTACGC AAAAAAGAGT TGGTGAGCAG TGTTCGCGGT CCAGGTGGTG GTTATAAACT GGGCAAAGAG CGTCATCAAA TCTCTGTAGC AATGATTATT GATGCTGTTA ATGAGTCCGT AGACGTCAGA AAATGCGGCG GAAAAGGGGG CTGTGCAGAA GATGGGGTAC AGTGTTTGAC ACACTCTTTG TGGGCTCAGC TGAGTGATCG CATCAGTACT TTTTTAGATA ATATTACCCT TGAAGAGCTA ATGGTCTCTG ATCATGTACA GCATATTTCT GGAATTCAAA ATAATAAATT TAACCAAACT GAAAAGCTAA ATGTTAAGTC ACACTAA
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Protein sequence | MKLTSKGRYA VTAMIDVAIK EHTGPVPLAD ISARQGISLS YLEQLFSKLR KKELVSSVRG PGGGYKLGKE RHQISVAMII DAVNESVDVR KCGGKGGCAE DGVQCLTHSL WAQLSDRIST FLDNITLEEL MVSDHVQHIS GIQNNKFNQT EKLNVKSH
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