Gene Ping_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1309 
Symbol 
ID4625841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1626485 
End bp1627525 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content44% 
IMG OID639796524 
Productdiheme-containing SoxA-like protein 
Protein accessionYP_942734 
Protein GI119945054 
COG category[C] Energy production and conversion 
COG ID[COG3258] Cytochrome c 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAT ACCTAATCGC GCTGGCAACT GCCACCTTAT TTTCACAAAG CGTTATGGCA 
ACGACGGAGA TGGAACTGCC GGATAGGCAA GCTGAGCTGC CGGCACACCC AAAAACAAAA
AAAGTGGATC AATTAGTACC ACGGGACTTA AGCACTATTC CCAATACGCC TTTTGGTGCA
AAAGTAAAAC AGGGCTACTC CCTGTTTGTT AATTCACAAA CCCTACGAGA CAAGTACGTC
GGTAACGAAC AAAACTGTGT CAATTGCCAT ATGCAGGCAG GCATGAAAGC CAATTCAGCC
CCACTTTGGG GAGCGTTTAT GGCCTACCCT GCTTATCGTT CTAAAAACGA CAAAGTAAAT
ACCTATGGGG AACGTATTCA AGGTTGTTTT ACTTACTCAA TGGACGGTAC TCCACCAGCA
AAAGACTCTC CAGAGTTAGT CGCACTGAGT GCCTACTCTT ATTGGCTGGC AATGGGCGGA
TTATTCGATC AATACGACAT GCAGGATAGA CCTATTTCGG AATTATCTGA TGCAGCCCTG
CAATTAGGTG GTAATGATCC ATCATTTATT TTACCTGTTG AAATGAAAGA AGATTTACCC
GCAGGAAAAC GGGGAACCTT AGCAGGTCGT AGCTACCCTA AACTTGACAA ACCTGAGCAA
GGCCCTTCAA TTGAACGTGG GGAGATTGTT TATAATACAA CCTGTGCAAG TTGTCATGGT
GCAAATGGCG AAGGCATTAA AGCCAACGGT GTACAATCTT TCCCACCATT ATGGGGCAAA
GATTCGTTCA ACTGGGGCGC AGGAATGCAT CGTGTTAATA CAGCGGCATT CTTTATCTAT
GAAAATATGC CACTGGGTAA AAGCATTCAA ATAGCCAAAC AACAAGCATG GGATGTAGCC
GCCTTTATGA ACAGTCATGA ACGCCCTCAA GATCCTCGTT TTAACGGCGA TTTAAAGGCA
ACTCAGGAGA AATATCATAA TCACCAGGGC TACTACGGAA AAACCGTTAA TGGTAAAGTG
ATCGGCTCCA ACGCATTTTA A
 
Protein sequence
MNKYLIALAT ATLFSQSVMA TTEMELPDRQ AELPAHPKTK KVDQLVPRDL STIPNTPFGA 
KVKQGYSLFV NSQTLRDKYV GNEQNCVNCH MQAGMKANSA PLWGAFMAYP AYRSKNDKVN
TYGERIQGCF TYSMDGTPPA KDSPELVALS AYSYWLAMGG LFDQYDMQDR PISELSDAAL
QLGGNDPSFI LPVEMKEDLP AGKRGTLAGR SYPKLDKPEQ GPSIERGEIV YNTTCASCHG
ANGEGIKANG VQSFPPLWGK DSFNWGAGMH RVNTAAFFIY ENMPLGKSIQ IAKQQAWDVA
AFMNSHERPQ DPRFNGDLKA TQEKYHNHQG YYGKTVNGKV IGSNAF