| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1302 |
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| Symbol | |
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| ID | 4625834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1613212 |
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| End bp | 1614438 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639796518 |
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| Product | exonuclease subunit SbcD |
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| Protein accession | YP_942728 |
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| Protein GI | 119945048 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.315565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAT TAATGAAGAT ATTACACACT TCAGACTGGC ATCTTGGTCA GTATTTTATG
ATGAAAACCA GAGAGTCAGA GCATTTACAT TTTTTAAACT GGTTAATTGA AGTGGTCAAT
AAGCAACAGA TCGATGCATT AATCGTTGCC GGTGATATTT TTGATAGCGC ATCCCCGCCT
TCCTACGCGC GCAAATTATA CAGTGATTTT ATTGTCAGAT TGCAAAAAAG CAGCTGTCGC
CAGCTTATTA TTATGGCGGG GAATCATGAC AGTATTGCCG TGCTCAATGA AAACAAAGAT
TTATTAAAAG CATTGGATGT TTCTGTATTA GCCGGATTAA GTGATGATTT AAACGAGCAC
ATTATTGAAC TTAAGGATGA TAGGCAAAAT ACGCAGGCAT TAGTTTGTGC ATTGCCTTTT
TTACGGGCAG CAGATGTGAT GAGAAGTGTT CAGGGTAGTT CGGCCGCTGA TAAACAGATT
TCTCTGCAGC AGGGCATAGC GGACACCTAC CAGTCGATTT TCGAACTCGC TAATGCGCAG
TGTCATGAGA AAGCCCTTCC TATTATTGCA ACCGGGCATC TGACTGCGGT GGGCTGCAGT
GTTTCTGACT CGGTGCGTGA AATTTATATC GGCACACTGA CCGCTTTCCC TGCTGTGCTC
TTCCCTGCTT TTAACTATAT TGCCCTGGGA CATTTACACC GTGCGCAAAA AGTACAAAAA
ACCGACCATA TTCGTTATTG CGGCAGCCCG ATTGCCTTGA GCTTTGATGA AACCAGGCAG
CAGAAAAATA TTAATATTAT TGAATTTGAT ACAAATAATG CCTTAACCGT TAATGAGACG
GTGATCCCTG TTTTTCAGAG AATGCAGGTT ATCAGCGGAG ATTTAGAATC TGTAATAGAG
CAGTTACAAG AGCTTAAAAA AGAGTTAGCG GGTGAAAGTG CCTGGATAGA GGTCAAGCTC
AAGCAGGCTT TTTATCTTTC CGATGTGCAT GCATTATTAA ATGAACAGGT CCAGGAAAGT
CAAATAGAAA TTTTAAAAAT CAGCAGTCCG ACTATTAATG AAAAAAATCA GTATCAGGCT
GCGGATAAAT CAACGCTGGA TAATTTAACA CCGGCAGATC TTTTTCAGCA TCGTTTACAG
ATTGAAGACA GCTACAGTGA CCAGCAGAGA GAGCAGTTAA CTAAACTGTT TGCCGAAGTC
TGCTCTGAAG TGGAGCATAA ATCATGA
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| Protein sequence | MDKLMKILHT SDWHLGQYFM MKTRESEHLH FLNWLIEVVN KQQIDALIVA GDIFDSASPP
SYARKLYSDF IVRLQKSSCR QLIIMAGNHD SIAVLNENKD LLKALDVSVL AGLSDDLNEH
IIELKDDRQN TQALVCALPF LRAADVMRSV QGSSAADKQI SLQQGIADTY QSIFELANAQ
CHEKALPIIA TGHLTAVGCS VSDSVREIYI GTLTAFPAVL FPAFNYIALG HLHRAQKVQK
TDHIRYCGSP IALSFDETRQ QKNINIIEFD TNNALTVNET VIPVFQRMQV ISGDLESVIE
QLQELKKELA GESAWIEVKL KQAFYLSDVH ALLNEQVQES QIEILKISSP TINEKNQYQA
ADKSTLDNLT PADLFQHRLQ IEDSYSDQQR EQLTKLFAEV CSEVEHKS
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