Gene Ping_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1296 
Symbol 
ID4625314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1601190 
End bp1602470 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content41% 
IMG OID639796506 
Productglucose-1-phosphate adenylyltransferase 
Protein accessionYP_942722 
Protein GI119945042 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0448] ADP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR02091] glucose-1-phosphate adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACACA GAAGTGATAG GTATATCAGT AACCTCACCA AAGATACCTA TGCATTGGTT 
TTAGCAGGCG GTCGTGGTAG TCGATTATTC GAACTGACAG ATTCGCGCGC TAAACCTGCC
GTCTATTTTG GTGGTAAATT CCGGATCATT GATTTTTCAT TATCAAACTG TATCAATTCA
GGTATTAACC GCATAGGAGT CGCCACTCAA TACAAATCAC ACTCTTTAAT CCGCCACATT
AACCGCGGTT GGGGAAATTT CAAGGCTAAT TTATCGGAAT TTGTTGAAGT TTTGCCCGCA
TCACAGGGTA ATAACAATGA TTGGTATCTG GGTACAGCCG ATGCTGTGTA TCAAAATATA
GATATTATTT GTGCTGAGCG TCCTAAATAT GTGTTAATTT TATCCGGCGA TCATGTATAT
CGTATGGATT ATGGTCCGCT AATAGCTGAG CATGTGGCCA ATAATGCCGA TATGACTGTC
TGTTGTCTTA AAGCGACAAC CGAAGAGGCT GCGGACAGCT TTGGCGTCAT GACAGTCAAC
GCGGATAATA AAGTGATTGC ATTTGATGAA AAGCCGGCCC AACCTAATGA AATACCCGAT
AATCCGGGTC AGTGCCTGGC TTCAATGGGT AATTATCTTT TTAATACTGA TTTTTTGTTC
GAACATCTGT TAAACGATTA TTCAAGCGAA AATTCCAGTC GTGATTTTGG GCATGATATT
ATCCCTTCAA TTATTAAAGA TAATAATGTT TTTTCCTATG CCTTTAAAGA TCCGGATAGT
GAGAATCAGC CCTATTGGCG TGATGTGGGT ACATTAGATG CATTTTGGGA AGCTAATATG
GAACTTGTTA CGCCTCAACC ACAACTCGAT TTATATGATA AAGCTTGGCC TATTTGGACA
TATCAGGAGC AGCTCCCACC GAGCAAATTT ATTTTTGATG ATGATTTGCG CCGTGGTCTA
GCGGTTGATT CAACGGTTTC CGCCGGTTGT ATCATCTCCG GTTCAACTGT TCGTAAATCA
TTATTATATT CAAGTGTTCA TACACACTCA TACAGCCTTA TTGAAGAATC GGTAGTACTC
CATGGTAGCC ATGTCGGTGA GCGCTGTAAA TTAAAACGGG TTATCGTCGA TAGTAAATGT
CATATTCCTG CAGGTTTAAC CATTGGTTAT GACCGAGAGC AGGATATAGA GAACGGTTTT
CGGGTGACCG AAAAAGGGAT CACCCTTGTT ACAAGTCAGA TGCTGAAAGC TTTAGCTAAA
AAACAAATGA TTATTGATTA A
 
Protein sequence
MPHRSDRYIS NLTKDTYALV LAGGRGSRLF ELTDSRAKPA VYFGGKFRII DFSLSNCINS 
GINRIGVATQ YKSHSLIRHI NRGWGNFKAN LSEFVEVLPA SQGNNNDWYL GTADAVYQNI
DIICAERPKY VLILSGDHVY RMDYGPLIAE HVANNADMTV CCLKATTEEA ADSFGVMTVN
ADNKVIAFDE KPAQPNEIPD NPGQCLASMG NYLFNTDFLF EHLLNDYSSE NSSRDFGHDI
IPSIIKDNNV FSYAFKDPDS ENQPYWRDVG TLDAFWEANM ELVTPQPQLD LYDKAWPIWT
YQEQLPPSKF IFDDDLRRGL AVDSTVSAGC IISGSTVRKS LLYSSVHTHS YSLIEESVVL
HGSHVGERCK LKRVIVDSKC HIPAGLTIGY DREQDIENGF RVTEKGITLV TSQMLKALAK
KQMIID