| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1242 |
|---|
| Symbol | |
|---|
| ID | 4624999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1551164 |
|---|
| End bp | 1551784 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639796455 |
|---|
| Product | (Acyl-carrier-protein) phosphodiesterase |
|---|
| Protein accession | YP_942671 |
|---|
| Protein GI | 119944991 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0937956 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATT TTTTAGCATT AAAATCAAGT ATATTAGGCG ATTACTCCAG TTCATCGAAA
TTAATTGATG AACTGTTAGC AAAATATACA CCGCAACAGG CAATAATTAC TGAACACGAC
CTTGCCGAGC AGCCCTTACC TGTTCTAGAT GGTGAGATAG CCATGGCAAT GAGATCGCCA
GAGCAGCTCA ATGATAAACA GCGTGATGCC TTAGCACTTT CCGATAAACT CATTTCTGAG
CTGGTAGCAT CCGATCTATT AGTGATTGCT GCACCTATGT ATAACTTTAT GATCCCGACA
CAATTAAAGA ATTGGATTGA TCTGGTCGCG CGCGCGGGTA AAACATTTTC CTATACGGAA
CAGGGACCGC AAGGCTTAAT CTCAGGTACT CGTGCCATTA TTGTGACAAC CCGCGGTGGT
ATGCATAAAG AGCAAGGGAC TGATCAGCAA GTTCCTTACT TAAAAACCGT ACTGAATTTT
ATGGGTATTA GTGATATTGA AGTCGTTTAC GCTGAATCAT TAGCGATGGG ACCCGAAACA
GCAGAGCTTA ACCTCGAGCA GGCGCGTAAG CAACTCAGTG TTTTTACTAA TGATATAAGT
ACGCTTAACA GCCAAAGTTA A
|
|---|
| Protein sequence | MINFLALKSS ILGDYSSSSK LIDELLAKYT PQQAIITEHD LAEQPLPVLD GEIAMAMRSP
EQLNDKQRDA LALSDKLISE LVASDLLVIA APMYNFMIPT QLKNWIDLVA RAGKTFSYTE
QGPQGLISGT RAIIVTTRGG MHKEQGTDQQ VPYLKTVLNF MGISDIEVVY AESLAMGPET
AELNLEQARK QLSVFTNDIS TLNSQS
|
|---|
| |