Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1240 |
Symbol | |
ID | 4624997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1548392 |
End bp | 1550224 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639796453 |
Product | citrate transporter |
Protein accession | YP_942669 |
Protein GI | 119944989 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0417903 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGTTAG TCACGTCTGT CAATAGCCAT TCGATTGCAG TGATGCTTTT AACTCTTTTA GCACTCTTTC TTTTTAGCAG AGAAAAAATT CCTTTAGAAA CGTCCAGTCT TTTTATTATT GTGGCTTTGA CAGTTGGTTT TACCATTTTC CCCTATCAAT ATCAAAACAC CGCCATCCAT GCGATCGACT TTTTTTCTGG ATTTGGGCAC GAGGCTTTAA TCGCTGTTTG TGCGCTGATG GTTGCCGGGC AAGGATTAGT TAGAACCGGG GCTTTAGAGC CTGTTGGCAG ATTATTGTCG AGGTTATGGA GTGTCTATCC AAAATTATCC CTTCTTCTTA CTCTGATCCT AGGAGCAACG TTAAGCGCCT TTGTTAATAA TGTACCCATT GTTATTTTAC TTTTACCTAT TTTGACAACG GTATCAATAC GGACAAATAC TTCAGCTTCA AAGGTATTGA TGCCGATGGG ATTTGCCACC CTAATAGGGG GAATGAGTAC AACAATTGGC ACATCGACCA ATCTATTGGT TGTTTCAGTT GCTGTTGATA TGGGATTAAA AAGTTTTGCT ATGTTTGATT TTTTCTTACC GGTCGCTGTT GCCGGGGCTT TTGCTATCGC CTATTTATGG TTAGTGGTTC CCTATTTTAT TAAAGAGCGG AAACCGCCTT TTTCTGATAC TTCACCGAGA ATATTTACGG CAAAACTCAT GATTCCTGCC GATTCAGTTT CTGAAAATCA AGCGCTGGAG CAGCTGGTAG CTAAAACAGA TGGCATGATG AGGGTGTTAA GAATTCACCG AAATAGCAGC GATATCTATT TATTACCAAA TTCAAAAACA ATTATAAAAG CCGATGATAT GTTAGTGGTA GAGGATACGC CTGAAAATTT AAAGAGTTTT GAAACAATAT TGGGCGCTGT TTTATATACC AGTTTAGGGG CAGTGGATGA AGCTCATCCC TTGATGGAAA AAGAGCAACA AATCGCCGAG GTTATTATTT CTCAGGGATC ACGATTAAAC AATACAATGC TTTCTCAAAC ACGATTTTTA GAAAGACATA ACCTGGTTGC CCTAGCACTG CATCGTCCCG GGAAAAAAAC AGAAACCCTT TTTAAGGGAA TGGCTGATAT TTATTTAAAA GTGGGTGATG TTTTACTGAT TCAAGGGAAA AGTGAGCATA TCGTTGAATT GAAAAAAAAC AGAGAATTAT TGGTGTTAGA TGCAACGTCT GATTTAACAC ACTCAAAACA GGCCCCTTGG GCATTTTTTA TTATGTTTAC TATTATTGCC ATTTCGGCAT TGGGTATTTT ACCGATAGCA ATCAGTGCCA CATTAGGCGT GTTTTTGATG TTTGTTACCA GCTGTATTAA TTGGAAAGAT GCTTCAAATG CGCTCAACAC TCAAGTTATT TTAATCGTGG TTGCTTCTTT GGCCTTAGGC CAGGCTTTAC TGAAAACGGG AGCAGCTTCT TATTTAGCAC ATCTGTTTAT ATTAGCAACA GAGGGTAGCT CTACGACTTT TATGTTAAGT GGTTTAATGT TGCTGATGGC AATTATGACC AATATAGTTT CAAATAATGC CGCAGCGGTG ATCGGAACAC CGATTGCGAT AGGCATTGCA CAACAGCTAA ATTTACCTGC AGAACCTTTT GTTTTAGCCG TTCTTTTTGG TGCAAACATG AGTTACGCCA CACCCATGGC TTATAAAACA AATCTTTTAG TCATGACCGC GGGTGGATAT ACCTTTAATG ATTTCTTAAA AATAGGGATA CCATTAATCA TTATCATGTG GGTGGTGCTC AGTTGGACAT TAACCATACT ATATGACTTA TAA
|
Protein sequence | MPLVTSVNSH SIAVMLLTLL ALFLFSREKI PLETSSLFII VALTVGFTIF PYQYQNTAIH AIDFFSGFGH EALIAVCALM VAGQGLVRTG ALEPVGRLLS RLWSVYPKLS LLLTLILGAT LSAFVNNVPI VILLLPILTT VSIRTNTSAS KVLMPMGFAT LIGGMSTTIG TSTNLLVVSV AVDMGLKSFA MFDFFLPVAV AGAFAIAYLW LVVPYFIKER KPPFSDTSPR IFTAKLMIPA DSVSENQALE QLVAKTDGMM RVLRIHRNSS DIYLLPNSKT IIKADDMLVV EDTPENLKSF ETILGAVLYT SLGAVDEAHP LMEKEQQIAE VIISQGSRLN NTMLSQTRFL ERHNLVALAL HRPGKKTETL FKGMADIYLK VGDVLLIQGK SEHIVELKKN RELLVLDATS DLTHSKQAPW AFFIMFTIIA ISALGILPIA ISATLGVFLM FVTSCINWKD ASNALNTQVI LIVVASLALG QALLKTGAAS YLAHLFILAT EGSSTTFMLS GLMLLMAIMT NIVSNNAAAV IGTPIAIGIA QQLNLPAEPF VLAVLFGANM SYATPMAYKT NLLVMTAGGY TFNDFLKIGI PLIIIMWVVL SWTLTILYDL
|
| |