Gene Ping_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1240 
Symbol 
ID4624997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1548392 
End bp1550224 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content39% 
IMG OID639796453 
Productcitrate transporter 
Protein accessionYP_942669 
Protein GI119944989 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0417903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTAG TCACGTCTGT CAATAGCCAT TCGATTGCAG TGATGCTTTT AACTCTTTTA 
GCACTCTTTC TTTTTAGCAG AGAAAAAATT CCTTTAGAAA CGTCCAGTCT TTTTATTATT
GTGGCTTTGA CAGTTGGTTT TACCATTTTC CCCTATCAAT ATCAAAACAC CGCCATCCAT
GCGATCGACT TTTTTTCTGG ATTTGGGCAC GAGGCTTTAA TCGCTGTTTG TGCGCTGATG
GTTGCCGGGC AAGGATTAGT TAGAACCGGG GCTTTAGAGC CTGTTGGCAG ATTATTGTCG
AGGTTATGGA GTGTCTATCC AAAATTATCC CTTCTTCTTA CTCTGATCCT AGGAGCAACG
TTAAGCGCCT TTGTTAATAA TGTACCCATT GTTATTTTAC TTTTACCTAT TTTGACAACG
GTATCAATAC GGACAAATAC TTCAGCTTCA AAGGTATTGA TGCCGATGGG ATTTGCCACC
CTAATAGGGG GAATGAGTAC AACAATTGGC ACATCGACCA ATCTATTGGT TGTTTCAGTT
GCTGTTGATA TGGGATTAAA AAGTTTTGCT ATGTTTGATT TTTTCTTACC GGTCGCTGTT
GCCGGGGCTT TTGCTATCGC CTATTTATGG TTAGTGGTTC CCTATTTTAT TAAAGAGCGG
AAACCGCCTT TTTCTGATAC TTCACCGAGA ATATTTACGG CAAAACTCAT GATTCCTGCC
GATTCAGTTT CTGAAAATCA AGCGCTGGAG CAGCTGGTAG CTAAAACAGA TGGCATGATG
AGGGTGTTAA GAATTCACCG AAATAGCAGC GATATCTATT TATTACCAAA TTCAAAAACA
ATTATAAAAG CCGATGATAT GTTAGTGGTA GAGGATACGC CTGAAAATTT AAAGAGTTTT
GAAACAATAT TGGGCGCTGT TTTATATACC AGTTTAGGGG CAGTGGATGA AGCTCATCCC
TTGATGGAAA AAGAGCAACA AATCGCCGAG GTTATTATTT CTCAGGGATC ACGATTAAAC
AATACAATGC TTTCTCAAAC ACGATTTTTA GAAAGACATA ACCTGGTTGC CCTAGCACTG
CATCGTCCCG GGAAAAAAAC AGAAACCCTT TTTAAGGGAA TGGCTGATAT TTATTTAAAA
GTGGGTGATG TTTTACTGAT TCAAGGGAAA AGTGAGCATA TCGTTGAATT GAAAAAAAAC
AGAGAATTAT TGGTGTTAGA TGCAACGTCT GATTTAACAC ACTCAAAACA GGCCCCTTGG
GCATTTTTTA TTATGTTTAC TATTATTGCC ATTTCGGCAT TGGGTATTTT ACCGATAGCA
ATCAGTGCCA CATTAGGCGT GTTTTTGATG TTTGTTACCA GCTGTATTAA TTGGAAAGAT
GCTTCAAATG CGCTCAACAC TCAAGTTATT TTAATCGTGG TTGCTTCTTT GGCCTTAGGC
CAGGCTTTAC TGAAAACGGG AGCAGCTTCT TATTTAGCAC ATCTGTTTAT ATTAGCAACA
GAGGGTAGCT CTACGACTTT TATGTTAAGT GGTTTAATGT TGCTGATGGC AATTATGACC
AATATAGTTT CAAATAATGC CGCAGCGGTG ATCGGAACAC CGATTGCGAT AGGCATTGCA
CAACAGCTAA ATTTACCTGC AGAACCTTTT GTTTTAGCCG TTCTTTTTGG TGCAAACATG
AGTTACGCCA CACCCATGGC TTATAAAACA AATCTTTTAG TCATGACCGC GGGTGGATAT
ACCTTTAATG ATTTCTTAAA AATAGGGATA CCATTAATCA TTATCATGTG GGTGGTGCTC
AGTTGGACAT TAACCATACT ATATGACTTA TAA
 
Protein sequence
MPLVTSVNSH SIAVMLLTLL ALFLFSREKI PLETSSLFII VALTVGFTIF PYQYQNTAIH 
AIDFFSGFGH EALIAVCALM VAGQGLVRTG ALEPVGRLLS RLWSVYPKLS LLLTLILGAT
LSAFVNNVPI VILLLPILTT VSIRTNTSAS KVLMPMGFAT LIGGMSTTIG TSTNLLVVSV
AVDMGLKSFA MFDFFLPVAV AGAFAIAYLW LVVPYFIKER KPPFSDTSPR IFTAKLMIPA
DSVSENQALE QLVAKTDGMM RVLRIHRNSS DIYLLPNSKT IIKADDMLVV EDTPENLKSF
ETILGAVLYT SLGAVDEAHP LMEKEQQIAE VIISQGSRLN NTMLSQTRFL ERHNLVALAL
HRPGKKTETL FKGMADIYLK VGDVLLIQGK SEHIVELKKN RELLVLDATS DLTHSKQAPW
AFFIMFTIIA ISALGILPIA ISATLGVFLM FVTSCINWKD ASNALNTQVI LIVVASLALG
QALLKTGAAS YLAHLFILAT EGSSTTFMLS GLMLLMAIMT NIVSNNAAAV IGTPIAIGIA
QQLNLPAEPF VLAVLFGANM SYATPMAYKT NLLVMTAGGY TFNDFLKIGI PLIIIMWVVL
SWTLTILYDL