| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1212 |
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| Symbol | hypB |
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| ID | 4623763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 1514937 |
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| End bp | 1515731 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639796427 |
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| Product | GTP hydrolase, accessory liganding Ni into hydrogenases, HypB |
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| Protein accession | YP_942643 |
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| Protein GI | 119944963 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.113745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGTAAAG TTTGCGGTTG TAATCAAGCT GAAGTGACTA TAGAAGGCCC ACATGATCAC
CATCATCATA ACCATCAGCA TCAAGATATT GAACAACATT CGTCAGATAT TTTAACCTCT
GCAGCAAGTA CTCCCAGGAT GATTGAAATT GAACAAAATA TTTTATCTAA AAATAATTAT
TACGCCAAGC TTAATCGCGA GCAATGGCTG GCCAATAAGA TTTTCTCAAT CAATCTTATC
TCCAGTCCCG GATCAGGTAA AACCACGTTA TTAATTGACA TTATTAAACG TATCAAAGAG
CAGCACTGCA TTTATGTGAT TGAGGGGGAT CAGCAAACTT CGCTTGATGC CACAAGAATC
AGAGAAACCG GGGTTCAAGC GCTGCAGGTT AATACTGGCA AAGGCTGTCA CTTGGACGCG
CATATGGTAG GTCATGCGGC AGTGCATCTG GGTATGCAGA AAAACGCATT TTTGTTTATC
GAAAACGTCG GCAACCTGAT TTGTCCGGCG GGTTTTGATT TAGGAGAAGC GCATAAGGTG
GTTATCTTAT CGGTCACCGA AGGTGAGGAT AAACCCTTAA AATACCCGGA AATTTTCCAT
GCTGCCGATC TGATGGTGAT TAACAAAATC GATCTGCTGC CCTACGTTAA TTTTGATCTG
CAGCAGTGCA GTGCTTATGC AAAACAGATT AATCCTGAGA TTAAAATCAT CCCCCTTTCC
GCTACTTCCG GTGAGAATAT GGAACAATTG AAGGATTGGT TGATTGCCGG AAAAGCGGAG
CTTCAATCAG GTTAA
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| Protein sequence | MCKVCGCNQA EVTIEGPHDH HHHNHQHQDI EQHSSDILTS AASTPRMIEI EQNILSKNNY
YAKLNREQWL ANKIFSINLI SSPGSGKTTL LIDIIKRIKE QHCIYVIEGD QQTSLDATRI
RETGVQALQV NTGKGCHLDA HMVGHAAVHL GMQKNAFLFI ENVGNLICPA GFDLGEAHKV
VILSVTEGED KPLKYPEIFH AADLMVINKI DLLPYVNFDL QQCSAYAKQI NPEIKIIPLS
ATSGENMEQL KDWLIAGKAE LQSG
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