Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1203 |
Symbol | |
ID | 4623754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1501758 |
End bp | 1504556 |
Gene Length | 2799 bp |
Protein Length | 932 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639796418 |
Product | sensor histidine kinase PAS domain-containing protein |
Protein accession | YP_942634 |
Protein GI | 119944954 |
COG category | [S] Function unknown [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain [COG2202] FOG: PAS/PAC domain [COG3287] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00343755 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.259486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTAA TAAACTACCA GTTTAAAACA AAAAATGATT TAGAACTTTT TATAGATGAA AATATCAAAA AGACTCATCT TTCTATTTTA ATTCAAGTTT TTAGCGGTGA TTTAAATATT GACAATATCC TGCAAGTTTT AGATATTTTA AAGTCCAAAC TCCCACATGC AGCCATCATT GGTTGCTCAA CGGCTGGCGA GATTGTTTCT GGCGCCATGA AAAATAATAC TCTTCAAATT TCTTTCTCTC TTTTTGAAAA AACCAATCTC CAACTTTTTT ATTACCCTCA AACAAACTTT GAAGATGGAG AGAAAGCTTC AAGTGAAATA GTGTCTCAAA ATACAAAAGC TGTTATCGCT TTTAGTGAAG CATTTAAAGG TGATTCTGAA CTTTTTTTAG AAGGGTTCTC ATCTAAAAAA CAACATATCC CTATCTCTGG CGGAAATGCC GGTGATAATC TTTTATATAA AAAAACCTTT ATTATCTATG ACAATAAGAT TTATTTTGAG GGCATCGTCC TGTGTGCACT GAATAGCGAC AGCTTATGTG TACACTCAAA TTATTCCTTC AGCAGTGTGT CTATTGGTAC AGAAATGATT GTCACTAAGG CTGTGGATAA TGTGATCTAT GAGATAGATC ACACGCCGGT CAAGAAAATT TACCAATACT ATTTGGGAGA GCATATTCTA GAAAATTTTC CAGTCAGTGT TCTCGAATTT CCATTGGTAA AAATAGAGGA GGAAATGAGT GTTGCCAGAA TAGCCATGAG CATGACGGAA GAGGGTGGAT TTATCTATCT AGGTCATTTT AAAAATGGCG ATAAGGTGAA ATTTGCCATA ACAAACAATG CAGAAATATC TTCAAAATCA TATGATTTAT ATAAGAATAT TATTTGTAAT CCAGTTGAAG CTACTTATAT TTATTCATGT TCTGCTAGGA AACAATTCCC CAAAAAATGT TTGAATTATG AACTTCGATT GATTGAAAAA ATAGCCCCTT CAGTTGGCTT TTTCAGCTAT GGAGAGTTTT TTCATTCAAA AATAAAAAAT CAACTTTTAA CTGTCACTAC AACGACCCTG AGTTTGTCTG AAGCAGATAT TATACAAAGC ACAGATGAGG TGCTAGAAAG CATGCGCAGC ACTAATATGC TGAGTTCATT GGTACACTTA GTTAATGTCT CAGATGAGAA CTTAAATCAA TATAAAGAGC TTTTAGATAA GAGTTCTATT GTGTCAAAAG CCGATACTCG AGGGGACATC ATTTATGTTA ATGATGAGTT TTGTACTATT TCGGGCTACT CTCGAGAAGA ATTGCTTGGC AATAATCACA GTATCGTTAG GCATCCGGAT AACAGTAATG CCATATTTAA AAACATGTGG ACGACTATTA CGGCTAAAAA AGTCTGGAAA GGCACGCTAA AAAATCGTGC AAAAGATGGC TCCACCTACT ATGTAAAGAC CTTAATTATG CCTATTCTAG ATGACTCGGG ACAGATTATA AGTTATATAG CGGCAAGAAC GGACGTAACA GAACTAATAG AAAAAGACAA AATTATTAGA CAACAGTATA AAGATAAGTT GACCGGGTTA CAAAATAGAA ATGCACTGAT AGATAAACTA AAAAAAATCA AGAATGAAGA TGCGACGCTT ATTCTTATTA ATATAGATAG ATTTTCTGAT ATTAATGATT ATTACGGCTA TGAAAAAGGT GATAAAACCT TGGGACTCTT TGCATCTGTT CTTAAAAATA AATATTCTGA ATTCTTTAAA ATAAACGGAG AAATCGTTAA AATAAGGGGC GAAATATTTA GAATAAGCGG TGATGAGTTT GCAATACTTT GCGAACATTC ATTAGATAAA GAAACAAAAG AGATGATAGC AGGCTTGATT ATTGATCTGG AGAATGAAGT CTATGAAATA CTGGACGATA ATATTACCTT GCTTTTATCT TGCGGAGTGG CCAGTGGCGC GAAAAATGAA ATATATAATC TTGCCCATAT TGCCTTAAAA GAAAATAAAA AAGATAATAA TATAGTTACT TTTTTTAATG ATAATATGAA CTTATATAGA AAAATTGCAG ATAATATAAA AATAATAGCA AGCATAAAAG AGGGAATACT TAACGATAAA TTTGTGCCCT TTTATCAAGG CATAGTTAAT AATAAAACCA AAAAAATAAC TAAATATGAG TGTCTGATAC GCTTAAAAGA AGAAAATGGC AAGGTTCTGG CGCCGTACTT TTTTCTGGAA CATGCTAAAA AAGCGAAGCT TTATTATAAG CTTACGATGA TTATGATCAG GAAATCATTT GAAAAGTTTG CAGGCAATAA CTATGATTTT TCTATCAACT TTACACTTCA AGATATTCAA TCCGTGACCG TTGTAAGCAT GCTGATGGAT TATCTTGAGC AATATCAATG CGGAAACAGA TTAATTATAG AAATAGTCGA GTCTGAAGGA ATTGAAAATT TTAATGAACT GTCAGATTTT ATAAAACAGA TTAAAAAATA CGGTTGTAAA GTGGCAATAG ATGATTTTGG ATCAGGCTAT TCTAACTTTC ATTATTTATC AAAATTAGAT GTGGACTATA TAAAAATAGA TGGCTCTTTA ATAAAAAATA TAGATAATGA CCCCTCTCAA CTTGCAACCG TTGAGAGTAT TTTACTTTTT GCTAAAAAGA TGAATATAAA AACGATTGCC GAATTTGTAG AGACAGAAAA TATTTATGAT ATTTTAAATG ATTTAGGCGT TGATTTTTCC CAAGGGTACT ATTTTTCTAA ACCACAAGAA AGCATCTAG
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Protein sequence | MKLINYQFKT KNDLELFIDE NIKKTHLSIL IQVFSGDLNI DNILQVLDIL KSKLPHAAII GCSTAGEIVS GAMKNNTLQI SFSLFEKTNL QLFYYPQTNF EDGEKASSEI VSQNTKAVIA FSEAFKGDSE LFLEGFSSKK QHIPISGGNA GDNLLYKKTF IIYDNKIYFE GIVLCALNSD SLCVHSNYSF SSVSIGTEMI VTKAVDNVIY EIDHTPVKKI YQYYLGEHIL ENFPVSVLEF PLVKIEEEMS VARIAMSMTE EGGFIYLGHF KNGDKVKFAI TNNAEISSKS YDLYKNIICN PVEATYIYSC SARKQFPKKC LNYELRLIEK IAPSVGFFSY GEFFHSKIKN QLLTVTTTTL SLSEADIIQS TDEVLESMRS TNMLSSLVHL VNVSDENLNQ YKELLDKSSI VSKADTRGDI IYVNDEFCTI SGYSREELLG NNHSIVRHPD NSNAIFKNMW TTITAKKVWK GTLKNRAKDG STYYVKTLIM PILDDSGQII SYIAARTDVT ELIEKDKIIR QQYKDKLTGL QNRNALIDKL KKIKNEDATL ILINIDRFSD INDYYGYEKG DKTLGLFASV LKNKYSEFFK INGEIVKIRG EIFRISGDEF AILCEHSLDK ETKEMIAGLI IDLENEVYEI LDDNITLLLS CGVASGAKNE IYNLAHIALK ENKKDNNIVT FFNDNMNLYR KIADNIKIIA SIKEGILNDK FVPFYQGIVN NKTKKITKYE CLIRLKEENG KVLAPYFFLE HAKKAKLYYK LTMIMIRKSF EKFAGNNYDF SINFTLQDIQ SVTVVSMLMD YLEQYQCGNR LIIEIVESEG IENFNELSDF IKQIKKYGCK VAIDDFGSGY SNFHYLSKLD VDYIKIDGSL IKNIDNDPSQ LATVESILLF AKKMNIKTIA EFVETENIYD ILNDLGVDFS QGYYFSKPQE SI
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