| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1191 |
|---|
| Symbol | |
|---|
| ID | 4623588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 1481429 |
|---|
| End bp | 1484008 |
|---|
| Gene Length | 2580 bp |
|---|
| Protein Length | 859 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639796403 |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | YP_942624 |
|---|
| Protein GI | 119944944 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0495] Leucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.663748 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGT TATATAATCC TAAAGAGATT GAAAAAAAAT TCCAAACTAA TTGGGATGAA
AACCAGTCAT TTAAGGCCAC GGAAGACCCC TCTAAAGAAA AATATTACTG CCTTTCCATG
TTTCCATACC CAAGTGGCAA ACTGCACATG GGTCACGTAC GCAATTACAC TATCGGTGAT
GTTATTTCCC GTTACCAACG CATGCAGGGC AAAAATGTAA TGCAGCCTAT GGGCTGGGAT
GCCTTTGGTC TGCCCGCTGA AAATGCTGCC ATTAAAAATA ATACCGCACC AGCAGGTTGG
ACTTACGAAA ATATCGCTTA TATGAAAACA CAGCTTAAAC AGTTAGGTTT TGGTTACGAC
TGGAGTCGTG AACTGGCCAC TTGCCAACCT GAATATTACC GCTGGGAACA ATGGTTTTTT
ACAAAATTGG TTGAAAAAGA TCTGGTTTAT AAAAAAATGG CCACCGTTAA CTGGGATCCT
GTTGATCAGA CGGTTTTGGC AAATGAACAG GTTATTGACG GTAGAGGCTG GCGCAGCGGT
GCATTAGTTG AACAAAAAGA AATACCGCAG TGGTTTATTA AAATAACCGC CTATGCACAA
GAATTATTAG ACGATTTAGA TAAGCTTGAC GAATGGCCAG AGCAGGTACG TACTATGCAG
CGTAACTGGA TTGGACGTTC TGAAGGTGTC GAAATGGACT TTAAAGTAAG TGGAAAAGAA
GAAAGTTTTT CTGTTTATAC AACACGTCCG GATACCGTCA TGGGAGTCAC CTATGTCGCG
GTTGCCGCGC AACATCCGTT AGCGCTAGAA GCAGCTAAGA ATAATCCAAC TCTAGCAGCA
TTTTGTAAAA AATGTAAAAA CGTAAAATTA GCAGAAGCTG AAATTGCGAC TATGGCCAAA
GAAGGTGTCG ATACCGGCTT TAAAGCGATT CACCCTATTA GCGGGTTAGA AGTGCCGATT
TGGACCGCAA ACTTTGTGCT TATGGGTTAC GGCTCTGGCG CTGTTATGTC GGTGCCGGCT
CATGATCAGC GTGATTATGA ATTTGCCAAA AAATACGACC TAACGATTAA AGCGGTAATT
AAACCTGCCA ATACCGATCT TGATATCTCC GTTGAGGCTT ACACTGAAAA AGGTGTTTGT
TTTGATTCTG GCGAATTTGA TGGTTTAGAC TTTAGTGCTG CATTTGATGC CGTAGAAACA
AAATTAGTTG CAGAGAATAA AGGCAAGCGT CAAGTAAACT TCCGTTTACG TGATTGGGGT
GTTTCACGCC AGCGTTACTG GGGGACCCCG ATCCCAATGC TTAACCTGGA AGACGGTTCC
GTTGTGCCTG TCCCGGAAAA CGAGCTGCCG GTTATTCTGC CTGAAGATGT ACAGATGAAC
GGTATTGTAT CCCCCATTAA AGCCGATCCT GACTGGGCTA AAACAACTTA TAACGGCCAG
CCGGCAACAC ACGAAACAGA TACCTTTGAT ACCTTTATGG AATCAAGCTG GTACTACGCA
CGTTACTGCT CACCGCAAAG CGATGATGCT ATGTTAGATC CTGAGAAAGC GAATTACTGG
CTGCCGGTTG ATCAATACAT AGGCGGTATT GAACATGCAA TATTACATCT TCTATACTCA
CGCTTCTTTC ATAAATTATT ACGTGACTTT GGTTTAGTCG ATTGTGATGA ACCATACAAA
AAACTGCTTA CTCAAGGCAT GGTATTAGCC GACGCTTATT ATTATGAAGA TGCCAAAGGT
GGAAAAGTCT GGATTGCACC CACGGATGTA GAAACTGAAA CCGATGAAAA AGGTAAAGTC
ATTTCTGCCG CCACAAAAGA CGGGCAAACA GTCATTTATG ACGGCATGAG CAAAATGTCT
AAATCTAAAA ATAACGGTGT TGACCCTCAG GTGATGATCG ATAAATACGG CGCAGACAGT
GTGCGTTTAT TTATGATGTT TGCCGCACCT GCTGATCAAA CATTAGAATG GTCAGACTCA
GCCCTTGAAG GTTCTCTGCG TTTCTTAAAA CGTTTATGGA AAATTGCTTT TGACCACTTG
GCATTGGGCG CTGTTGCCGA TTTAGATCTT AAATCACACA CAGAAGCACA AAAAACACTG
CGCCGCGAAC TACATAAAAC AATTGCAAAA GTGACCGATG ATATCGGCCG TCGCCAAACC
TTTAATACCG CGATTGCATC TGTGATGGAG TTAATGAATA AATTAACTAA AACGGCAACA
AAAACTGAGC AGGATCGTGC TATTTTACAA GAAGCACTGC TTGCCATTAC TAAATTGCTG
GCCCCTATTA CGCCGCATAT CTGCGCAGAA TTATTTGAAG TATTAGGTCA AACTGAAGAG
ATATTAAATG CACCTTGGCC CACTGTTGAC GAAAGTGCCT TAGTTGAAGA TTCAAAGCTT
ATTGTCGTGC AGGTAAACGG TAAATTACGG GCTAAATTGA CCGTTGCCGC TGACGCACAA
CAGGAAACGG TTCAGGCAAT TGCGATGGAA AATGAAAATG TGAGTAAATT TACCGATGGG
AAAACCATTC GTAAAATCAT TTTTGTTCCG GGGAAATTAT TGAATATAGT GGCTAACTAA
|
|---|
| Protein sequence | MQELYNPKEI EKKFQTNWDE NQSFKATEDP SKEKYYCLSM FPYPSGKLHM GHVRNYTIGD
VISRYQRMQG KNVMQPMGWD AFGLPAENAA IKNNTAPAGW TYENIAYMKT QLKQLGFGYD
WSRELATCQP EYYRWEQWFF TKLVEKDLVY KKMATVNWDP VDQTVLANEQ VIDGRGWRSG
ALVEQKEIPQ WFIKITAYAQ ELLDDLDKLD EWPEQVRTMQ RNWIGRSEGV EMDFKVSGKE
ESFSVYTTRP DTVMGVTYVA VAAQHPLALE AAKNNPTLAA FCKKCKNVKL AEAEIATMAK
EGVDTGFKAI HPISGLEVPI WTANFVLMGY GSGAVMSVPA HDQRDYEFAK KYDLTIKAVI
KPANTDLDIS VEAYTEKGVC FDSGEFDGLD FSAAFDAVET KLVAENKGKR QVNFRLRDWG
VSRQRYWGTP IPMLNLEDGS VVPVPENELP VILPEDVQMN GIVSPIKADP DWAKTTYNGQ
PATHETDTFD TFMESSWYYA RYCSPQSDDA MLDPEKANYW LPVDQYIGGI EHAILHLLYS
RFFHKLLRDF GLVDCDEPYK KLLTQGMVLA DAYYYEDAKG GKVWIAPTDV ETETDEKGKV
ISAATKDGQT VIYDGMSKMS KSKNNGVDPQ VMIDKYGADS VRLFMMFAAP ADQTLEWSDS
ALEGSLRFLK RLWKIAFDHL ALGAVADLDL KSHTEAQKTL RRELHKTIAK VTDDIGRRQT
FNTAIASVME LMNKLTKTAT KTEQDRAILQ EALLAITKLL APITPHICAE LFEVLGQTEE
ILNAPWPTVD ESALVEDSKL IVVQVNGKLR AKLTVAADAQ QETVQAIAME NENVSKFTDG
KTIRKIIFVP GKLLNIVAN
|
|---|
| |