Gene Ping_1147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1147 
Symbol 
ID4623888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1436215 
End bp1437282 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content43% 
IMG OID639796362 
ProductUDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 
Protein accessionYP_942583 
Protein GI119944903 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID[TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAATA AAAAAACATT AGTGGTCATG GCAGGCGGTA CCGGTGGGCA TGTATTCCCG 
GGACTTGCAG TGGCAGATGC ACTAAAAGAG CAGGGTTGGG CAGTCAGTTG GTTGGGCACA
GCGGATCGTA TGGAAGCGCA ACTTGTCCCT AAACATGGAT ATGAAATAGA TTTTATCGAT
ATTGCCGGCA TACGGGGAAA TGGCCTAAAA CGTTTATTGA TGGCACCCAT TCGGATCATT
AAATCAATCT GGCAAGCACG TTCTGTGTTA AAAAAACGCA GGGTTGATTT AGTCTTGGGA
ATGGGGGGAT TTGCCAGCGG ACCGGGTGGT ATTGCCGCCT GGAGCATGGG GATTCCGGTT
ATTTTACATG AGCAAAATGC CGTGGCCGGA CTAACAAATC GAATTCTATC ACTATTTTCC
AAGCGTGTAT TAATGGGCTT TTCAGGTGCT TTTAAAAGTG GTAAAGCTAT TTTGGTGGGC
AACCCTGTGC GCAAGCAGCT TGTTGATCTG CCTGTAAAAA AAATCTCGTC TGAGGATGTG
GCCCTTAAAG TACTCGTGGT TGGTGGGAGT TTAGGGGCTA AAGTATTAAA TGACTTATTA
CCCGCCGTTT TTAGTTCGTT TGACAATGAA AACTTTAATA TTATGCATCA GAGTGGTGAA
GGACATTATC AGGCTGTGCA AAAAGGTTAT GAACAACGGC TTGTTAAGGC AAATGTGCAA
GAATTTATTA CTGATATGGC GAGTGCTTAT GACTGGGCTG ATTTGGTTAT TTGCCGCGCG
GGGGCGTTAA CTGTTGCGGA ATTAGCGGTT GTCGGTTTAC CCGCGATTTT TGTTCCCTTG
CCACATGCCG TTGATGATCA TCAAACTAAA AATGCCCAAT ATTTAGTCTC CCAAGAGGCG
GCGGTGTTAA TCGCACAAAA AGAATTAACT GCAAAAAAAA TAAGCGATTA TTTGCGTCTA
TTTCTACAAA ATAGAAAATT ATTGACTGCG ATGTCACAAA AGAGTAGAAA AGCAGCCATT
ATTGATGCAA CAGAGAGTGT TGCATCTATC TGTAATCAAT TAGTTTAA
 
Protein sequence
MRNKKTLVVM AGGTGGHVFP GLAVADALKE QGWAVSWLGT ADRMEAQLVP KHGYEIDFID 
IAGIRGNGLK RLLMAPIRII KSIWQARSVL KKRRVDLVLG MGGFASGPGG IAAWSMGIPV
ILHEQNAVAG LTNRILSLFS KRVLMGFSGA FKSGKAILVG NPVRKQLVDL PVKKISSEDV
ALKVLVVGGS LGAKVLNDLL PAVFSSFDNE NFNIMHQSGE GHYQAVQKGY EQRLVKANVQ
EFITDMASAY DWADLVICRA GALTVAELAV VGLPAIFVPL PHAVDDHQTK NAQYLVSQEA
AVLIAQKELT AKKISDYLRL FLQNRKLLTA MSQKSRKAAI IDATESVASI CNQLV