| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1143 |
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| Symbol | |
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| ID | 4623884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1431075 |
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| End bp | 1432544 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639796358 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_942579 |
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| Protein GI | 119944899 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTTTA CCACAATAAA AAAAGAAGAA GGTATTAACA TGATCAGCCT AACACTTGCT
GAAATAGCCA AAGCAACCGC TGGGCAGATA ATTAATTGTG AGCACCCAGA GGCAGTTTTC
AATAATATCA GTACCGATAC CAGACAAATC AAATCGGGTG ATCTTTTTAT CGCACTGCGC
GGTGAACGCT ATGATGCGCA CCAATTTTTA GAAAAAGCCG TGCAACAGGG GGCGGGGGCG
TTATTAATTG ATCAGAAAAA AAGGAGTGAT TTACCCTGTG TTCTGGTACA AGATACGAGA
ATTGCATTAG GCCTATTAGC GAGTTATGTC AGGCAGCAAA TAGGCAGGTT AAAATGCGCC
GCTATTACCG GCAGTAATGG TAAAACAACC ACCAAAGAAT TACTCAGTGC AATACTTTGC
TGCCATACTG GTAATAATGA AAATGTGTTA GCAACCGCGG GTAATTTTAA TAATGATATC
GGTTTACCCC TTACTTTATT ACGTTTAACC GAAAAAACAC GTTATGCCGT GGTCGAGTTA
GGTGCTAACC ATTTAGGTGA AATTGCCTAT ACGGCGCAAC TTACAAAACC CGATGTGGCA
TTAATAAATA ATGTAATGCC TGCTCACCTT GAAGGTTTTG GATCGCTGCA GGGTGTCGCA
CAAGCAAAGG GGGAAATTTG GTCAAGTCTT GGAGACACTG GCATCGCGGT GGTGAATTTA
GATTCTGATT TCGCCAGTGA GTATTTAACC CAATTAAAAA AATTAAATAG ACAGGTATTC
ACATTTTCTA AAGAGAGTGA AAAAGCCCAT GTGAGTGCGT CAAATATTAT TTTTTCTTCC
TTGGGTAAGG CATCTTTTCG GCTTAATGTG ATGCTTAATA GGGACCCGCA AGCAATCTCT
ATTCAATTGA ATTTAGCTGG ATTACATAAT GTAAGTAATG CGCTTGCTGC CGCAACAATG
GCACTTGCAT TAGGCTGTAA CCTGAAGGAT ATACAGGCGG GTCTAGGTTT AGTGCAACAG
GTTGAGGGGC GAGTTGATAG TCGTGAACTC AATAAATTAG TGACCTTGAT TGATGATACT
TATAATGCTA ACCCTGCTTC TGTGAAAGTG GCTATTGATC TGCTCCAACA ATACGCTTCT
TCCCATCTTC TTGTTCTTGG CGACATGGCT GAATTAGGCG ATTTTAGTGA ACATGAGCAC
TTTCTGATTG GTGAGTATGC AGCGCAAAAA GGGATTCAAA CGTTAATCAC TTTCGGTAAG
CTTACGTTTA AAACATACCA GGCTTTCAAG CAAGCAGGGC AGGGTGAAGC CCTGCATTTT
GCTGATAAGA AACAATTAAA TGCTTACTTA GAAAACAGAC TATTAGAGCA AAAAAATAAG
CTGACGATCT TAGTGAAAGG CTCGCGTGGT TCAAAAATGG AAGAGGTTGT TAACTTTATC
AAGCAGGCAG CCAATAAATT CAGCGCTTGA
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| Protein sequence | MTFTTIKKEE GINMISLTLA EIAKATAGQI INCEHPEAVF NNISTDTRQI KSGDLFIALR
GERYDAHQFL EKAVQQGAGA LLIDQKKRSD LPCVLVQDTR IALGLLASYV RQQIGRLKCA
AITGSNGKTT TKELLSAILC CHTGNNENVL ATAGNFNNDI GLPLTLLRLT EKTRYAVVEL
GANHLGEIAY TAQLTKPDVA LINNVMPAHL EGFGSLQGVA QAKGEIWSSL GDTGIAVVNL
DSDFASEYLT QLKKLNRQVF TFSKESEKAH VSASNIIFSS LGKASFRLNV MLNRDPQAIS
IQLNLAGLHN VSNALAAATM ALALGCNLKD IQAGLGLVQQ VEGRVDSREL NKLVTLIDDT
YNANPASVKV AIDLLQQYAS SHLLVLGDMA ELGDFSEHEH FLIGEYAAQK GIQTLITFGK
LTFKTYQAFK QAGQGEALHF ADKKQLNAYL ENRLLEQKNK LTILVKGSRG SKMEEVVNFI
KQAANKFSA
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