Gene Ping_1137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1137 
Symbol 
ID4623878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1425287 
End bp1425613 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content41% 
IMG OID639796352 
Productiojap-like protein 
Protein accessionYP_942573 
Protein GI119944893 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000812131 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.662489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAGACG CACAATTAAA AAAATTTGTA TTACAACATC TTGAAGATTT CAAAGCGAAA 
GATATTACTG TAATCGATGT TTCTGCCACC TCAGATGTAA CTGATACTAT GATTATCTGT
ACGGGTAATT CTAAGCGTCA TGTTCGTTCT GTCGCAGAAC AAACCGCACT GGCAGCCAAG
AATGCAGGTG AATCCCCGTT AGGTATCGAG GGCTTAGAGG GCAGTGAGTG GGTATTACTG
GACTTGGGTA ATGTTGTTGT CCACGTTATG CAGGATGAAA CAAGACAGTT TTATCAACTT
GAAAAACTTT GGGAACAGTC TGCTTAA
 
Protein sequence
MQDAQLKKFV LQHLEDFKAK DITVIDVSAT SDVTDTMIIC TGNSKRHVRS VAEQTALAAK 
NAGESPLGIE GLEGSEWVLL DLGNVVVHVM QDETRQFYQL EKLWEQSA