Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1126 |
Symbol | |
ID | 4625046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1410031 |
End bp | 1411506 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639796341 |
Product | ribonuclease G |
Protein accession | YP_942562 |
Protein GI | 119944882 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0361848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.4675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTTG AATTATTAAT GAATATCACC CCCACCGAAA CACGCGTTGC GTTAGTTGAA GGTGGTGTAC TGCAAGAGCT ACATATAGAG CGTCAGGCGA CCAAAGGAAT TGTTGGTAAT ATATACAAAG GCAAAGTCAG CAGAGTGTTA GCCGGCATGC AAGCCGCTTT TGTTGATATT GGCTTGGAAA AGGCGGCATT TTTACATGCT TCAGACATTG TGCCCTTTAC AGAATGTGTT GCCAAGAATG AAAAAGCAAA ATTTAAAGTT GCAGATATCT CACAACTTGT CCGTCCAGGG CAGGATATTA TGGTGCAGGT GGTTAAAGAT CCGCTCGGCA CTAAGGGAGC CCGTCTTACA ACTGATATAA CCTTGCCTTC ACGCTATTTG GTTTTTATGC CTGGAACAGG CCATGTTGGT GTATCACAGC GTATTGAAAG TGCACAGGAA CGTGAACGTT TAAAGGTAAT CGCCCAAGGC TGCTGTGTCA ATGATCTGGG CGGCTTTATT ATCCGTACAG CGGCAGATGG CGCACCGGAA AAGGAGTTGA TTAACGATGC GGCTTTTTTA CTCCGAGTTT GGCGTAAAGT ATTGACGCGT CGTAAGCGGA CTGCTAGCAA AAACAGGCTA CTTTACCGTG ACTTAGGACT CGCATTTCGT ATACTGAGAG ATTTTGTTGG TGAGGAAATA GACAGAGTAC GTATTGATTC GCGATTAAAT TTTAGTCTGA TTCAGAAGTT TACCCATGAT TTTGTACCTG AACTGGAGGA TAAAATCGAA TGTTACCGGG GTAAAAGCCC TATTTTTGAT CTGTTCGATG TTGAAAATGA AGTGCAGCGT GCATTAGAGC GTAAGGTGGA ACTTAAATCA GGTGGATATT TGATTATTGA TCAGACCGAA GCGATGACCA CTGTTGATAT TAATACCGGT GCATTTGTTG GCCATAGAAA TCTTGAAGAG ACGATATTTA ATACCAATAT TGAAGCGACA CAGGCTATTG CCAGGCAATT ACGTTTACGC AATTTAGGCG GTATTATTAT TATTGATTTC ATCGACATGC AGTCAGTTGA ACATAAACGC AGAGTATTTA ACAGTTTAGA ACAAGCATTG TCAAAAGATC GTGTTAAAAC CAATATCAAT GATTTTTCTC CCTTAGGTTT AATTGAAATG ACACGCAAAC GCACGCAGGA AAGTTTAGAG CATATTTTCT GTGGTGTTTG TGAGCAGTGT AGTGGACGCG GTTATATTAA AACAGTAGAA ACCGTTTGTT ATGAAGTTCT GCGTGAAATA TTACGCGTGA ATCGCGCCTA TGATGCTGAT CGTTTTGTTG TTTATACGTC ACCTAAAGTG GCTGAGGCAT TAACGGGGGA TGAATCTCAT AACCTGGCTG AATTAGTTTT ATTTATGGAA AAACCGGTTA AAATTAATGC TGAGCCTCTC TATGGTCAAG AACAGTTTGA TGTTGTAATG ATGTGA
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Protein sequence | MSVELLMNIT PTETRVALVE GGVLQELHIE RQATKGIVGN IYKGKVSRVL AGMQAAFVDI GLEKAAFLHA SDIVPFTECV AKNEKAKFKV ADISQLVRPG QDIMVQVVKD PLGTKGARLT TDITLPSRYL VFMPGTGHVG VSQRIESAQE RERLKVIAQG CCVNDLGGFI IRTAADGAPE KELINDAAFL LRVWRKVLTR RKRTASKNRL LYRDLGLAFR ILRDFVGEEI DRVRIDSRLN FSLIQKFTHD FVPELEDKIE CYRGKSPIFD LFDVENEVQR ALERKVELKS GGYLIIDQTE AMTTVDINTG AFVGHRNLEE TIFNTNIEAT QAIARQLRLR NLGGIIIIDF IDMQSVEHKR RVFNSLEQAL SKDRVKTNIN DFSPLGLIEM TRKRTQESLE HIFCGVCEQC SGRGYIKTVE TVCYEVLREI LRVNRAYDAD RFVVYTSPKV AEALTGDESH NLAELVLFME KPVKINAEPL YGQEQFDVVM M
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