Gene Ping_1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1094 
Symbol 
ID4625807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1364334 
End bp1365005 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content43% 
IMG OID639796310 
ProductdTMP kinase 
Protein accessionYP_942532 
Protein GI119944852 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.43543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTT CGAAAAAGTC AGCTGCAGAA ATATTAGTGA GTAAATTTAT CGTTATAGAA 
GGCCTTGAGG GAGCTGGCAA AAGTACGGCT GTCTCTTATA TAACCAAGTG GTTATTCAAG
CAGAATATAG CGACCTGCGA TACTGTTTAT ACGCGTGAGC CGGGTGGCAC GGAATTGGCG
GAAAAAATGC GCGATATAGT GAAGATCGAA GTCACTGGTG AAAAATTAGA TGATAAAGCG
GAATTATTAC TGATGTATGC AGCCCGTGTG CAACTCGTTG AGCATATAAT TAAACCGGCA
TTAGTTGCGG GAAAAATTGT TGTGGGCGAT CGCCATAATA TGTCCTCTTT AGCTTATCAA
GGTGGTGGGC GAGGCATTGA TTTAGCGCTG ATTGAAGTGA TCAAAAAGTT GGCATTAGGT
GACTTTAAAG CAGACTTAAC ACTTTATCTG GATATTGATC CCGAACTTGG TTTACAACGC
GCAAGAGGGC GCGGAGAGTT AGATCGTATT GAGCGGCAAG CGATTGATTT TTTTGATCGT
ACGCGAGCCG TTTTCCTCTC TTTAGTAGCA AAGGATAAAA ATGCAGTCAC CATTAATGCT
GGTCAGTCCC CAGAGTTAGT TGAAAAAGCT ATCTTTGTGG CCTTAGATAA ATGGGTAATG
AGTCTTGCTT GA
 
Protein sequence
MPVSKKSAAE ILVSKFIVIE GLEGAGKSTA VSYITKWLFK QNIATCDTVY TREPGGTELA 
EKMRDIVKIE VTGEKLDDKA ELLLMYAARV QLVEHIIKPA LVAGKIVVGD RHNMSSLAYQ
GGGRGIDLAL IEVIKKLALG DFKADLTLYL DIDPELGLQR ARGRGELDRI ERQAIDFFDR
TRAVFLSLVA KDKNAVTINA GQSPELVEKA IFVALDKWVM SLA