Gene Ping_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1093 
Symbol 
ID4625806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1363331 
End bp1364329 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content38% 
IMG OID639796309 
Productaminodeoxychorismate lyase 
Protein accessionYP_942531 
Protein GI119944851 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.72202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACTA AAAAGATTGT CTTGAGCCTG TTTTTTTTGA TATTCCTGGT CTTAGGCAGC 
GTTATTTGGG GTCAGAAAAA ATTAAACAGT TATTTAAATA CGCCTCTGGT GAACCAACCT
ACCTTATTCA CTATTAATAA TGGCAGTAAT TTTCACCATT TAGGTAATAA CCTGTTAAAG
ACAGAAATTA TCTCTGACCT GACTTGGTGG AAAGTGCTGG GTAAACTACA TCCTGAATTA
ATCAATATAA AATCAGGTAC TTACCAGTTT GAGAAGGGCT TTACATTAAA TGATATATTA
ATGACCGTTA ATAAAGGTAT TGAGCATCAA TTCATTATTA CTTTTGTTGA AGGCAGTACG
TTTAAGGAGT GGTTACCGAT ATTAAATAAC GCTCCCTTTA TGAAACCGTT ACAGGAAACT
GAAGCGCAGA TATTAGTGCG CCTGAATAGT TCTTATGAAA AATTGGAAGG TTTGTTATTT
CCTGAAACTT ATCATTACAG TGCGGGCATG AGTGCCTTTC AGATAATTAA AAAATCCTAT
GTAAATCAGC AGCAGATATT AGAAAAACTA TGGGCTGACA GGGATAAAAC ACTGCCTTTT
AAAACGCCCT ATGAGGCACT TATTCTCGCA TCAATAATTG AGAAAGAAAG TGGCTTGTCA
GCTGATCGCG ATAAAATTGC CTCGGTTTTT ATTAATCGGA TGCGCATTGG TATGCGCTTA
CAAACCGATC CAACCGTTAT TTATGGTATG GGGGATCGTT ATGATGGACG AATCCGCAGT
AAAGATTTGC GTGAGGAAAC GGATTATAAC ACTTACCGTA TTAATGGGTT GCCCCCTACA
CCCATTGCGA TGCCAAGTGA AGCTGCGCTG TATGCCGCGC TGCACCCATC GACAACAAAA
TACTTGTACT TCGTGAGCAA GGGGGATGGC ACCTCTTATT TCTCTAAGAG TCTAAGAGAG
CATAATAATG CTGTGCAAAA ATATATTTTA GGAAAATAA
 
Protein sequence
MPTKKIVLSL FFLIFLVLGS VIWGQKKLNS YLNTPLVNQP TLFTINNGSN FHHLGNNLLK 
TEIISDLTWW KVLGKLHPEL INIKSGTYQF EKGFTLNDIL MTVNKGIEHQ FIITFVEGST
FKEWLPILNN APFMKPLQET EAQILVRLNS SYEKLEGLLF PETYHYSAGM SAFQIIKKSY
VNQQQILEKL WADRDKTLPF KTPYEALILA SIIEKESGLS ADRDKIASVF INRMRIGMRL
QTDPTVIYGM GDRYDGRIRS KDLREETDYN TYRINGLPPT PIAMPSEAAL YAALHPSTTK
YLYFVSKGDG TSYFSKSLRE HNNAVQKYIL GK