Gene Ping_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1088 
Symbol 
ID4625801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1358934 
End bp1359875 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content43% 
IMG OID639796304 
Productmalonyl CoA-acyl carrier protein transacylase 
Protein accessionYP_942526 
Protein GI119944846 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.440436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACT TTACATTTGC TTTCCCCGGT CAAGGCTCTC AACATGTTGG CATGTTGGCC 
GAGCTTGCAC AATCTTGCCC CGTTGTGGTT GAAACGTTTA AACAAGCAAG TGATGTGCTA
GGTTACGATC TTTGGGATCT TGTTCAACAA GGCCCTGCGG AAATATTAAA CCAAACAGAT
AAAACACAAC CCGCTTTATT AACAGCTTCC GTTGCACTTT GGCGCGTTTG GGCTGAGCAG
AAGGGTCCAA CACCTTCTGT TATTGCAGGA CATAGTTTGG GTGAATACTC AGCATTAGTC
TGTGCCGGAG TGATTGAATT TAAAGATGCC GTTAAATTGG TTGAATTACG CGGGCAGCTA
ATGCAGCAAG CTGTTCCAGC AGGCACTGGG GCAATGTCTG CCATTATTGG TTTAGATAAT
AATAAAATTG CCGAATGTTG TGTACAAGCT GCCGAGGGAC AAATTGTGTC GCCGGTTAAC
TTTAATTCAC CGGGCCAGGT GGTTATTGCG GGTAATAAAG AAGCGGTTGA GCGTGCTGGA
ATCCTATTAA AAGAAGCCGG TGCAAAACGT GTATTGCCTT TACCCGTGAG TGTGCCATCA
CATTGTGCCT TGATGAAACC TGCTGCGGAA AAATTGGCCG TTGCATTACA ATCGATTCAT
TTTAATACTC CAAACATTGC TGTGATTAAT AATGTTGATG TGGTTGCCGA AAGTGATGTT
GAAAAAATTA AAGATGCGCT TGTCCGCCAA TTATTTTGTC CGGTGCGTTG GAGTGATATT
GTTGAAAAAA TGGCATCCGA TGGCATTACA ATACAAGTTG AAGCTGGCCC TGGTAAAGTA
TTAAGTGGTT TAGTTCGTCG TATTAATAAA AGTCTAACTG CGCAAGTTAT TAACGATAAT
GCGACGCTTG AAAAAGCATT AGCTGCGGTT AAAGGAGAAT AA
 
Protein sequence
MTNFTFAFPG QGSQHVGMLA ELAQSCPVVV ETFKQASDVL GYDLWDLVQQ GPAEILNQTD 
KTQPALLTAS VALWRVWAEQ KGPTPSVIAG HSLGEYSALV CAGVIEFKDA VKLVELRGQL
MQQAVPAGTG AMSAIIGLDN NKIAECCVQA AEGQIVSPVN FNSPGQVVIA GNKEAVERAG
ILLKEAGAKR VLPLPVSVPS HCALMKPAAE KLAVALQSIH FNTPNIAVIN NVDVVAESDV
EKIKDALVRQ LFCPVRWSDI VEKMASDGIT IQVEAGPGKV LSGLVRRINK SLTAQVINDN
ATLEKALAAV KGE