Gene Ping_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1086 
Symbol 
ID4625380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1356904 
End bp1357944 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content39% 
IMG OID639796302 
Productfatty acid/phospholipid synthesis protein PlsX 
Protein accessionYP_942524 
Protein GI119944844 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.393418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTAAAC TTACTATTGC TATCGATGCA ATGGGGGGCG ATGTCGGCCC CCATATTCCT 
ATTTTAGCCG CTTTAAAATC ACTTCAGTTA CACCCCAATC TACACATTAT TATTGTGGGA
AACCGCACTC AACTGCTCCC TGTTTTAAAA AAATACCAGC TATCAGAGCA TGCTCGCTTA
AGTTTAATTC ATACTGATAA CGAGATATCT ATGGAAGTTA ATCCTGTTTA TGCATTACGT
CATAGGTCAG ACTCTTCTAT GCATATCGCC CTTAAACTTG TGTCACAGGG TAAAGTGGAT
GCTTGTGTCA GTGCCGGTAA TACCGGTGCA TTAATGTTGC TCGCCAAGCA AGCTTTAAAA
ACCCTACCGG GTATCTCTCG TCCTGCACTT ATCTCATCTT TACCTAATAT GCATTTAGGG
CATACTTATA TGCTTGATTT AGGGGCTAAT TTACAATGTG ACAGTCATAC TTTATTTAAT
TTTGCGGTGA TGGGCAGTGT GCTTTGCGAA AAGGTTGACC AAATTAATTC TCCCCGTGTC
TCTATTTTAA ATGTTGGCAA AGAAAAAAAT AAAGGTGGGG ATGTGCTCCA GCATTGTGCT
GAACTATTAA AGCAAACTAA GCATATAAAT TATGCCGGGT TTGTTGAAGC TAATGAGTTA
TTTACGTGCA GGTCTAATAT TATTGTGACC GATGGTTTTA GTGGAAATAT TGCACTGAAA
AGTTGTGAAG GTATGGGGCG AGTCTTCAGC GAACAACTGG ATAAAGCGAT AAATTCAAGT
TTATACAGCA AGTTGCTGGG AAAATTATTA AGACCCATAT TAAAAAAGCA ATTAAAACAT
TTGCATCCGG ATATGTATAA TGGCGCAAGT TTAATTGGAT TACGTGGTAT TGTTGTAAAA
AGTCATGGCA GCGCCAACGA AATTGCATTT ACCTGCGCTA TTGAGCATGC CATACAAGAG
ACTCAATGGC AGATTCCTGC AAGTATTTCA AAAAAGTTAG AAACTGTATT ATCAGAGCGA
GATGATTTAT CACATGAATA G
 
Protein sequence
MSKLTIAIDA MGGDVGPHIP ILAALKSLQL HPNLHIIIVG NRTQLLPVLK KYQLSEHARL 
SLIHTDNEIS MEVNPVYALR HRSDSSMHIA LKLVSQGKVD ACVSAGNTGA LMLLAKQALK
TLPGISRPAL ISSLPNMHLG HTYMLDLGAN LQCDSHTLFN FAVMGSVLCE KVDQINSPRV
SILNVGKEKN KGGDVLQHCA ELLKQTKHIN YAGFVEANEL FTCRSNIIVT DGFSGNIALK
SCEGMGRVFS EQLDKAINSS LYSKLLGKLL RPILKKQLKH LHPDMYNGAS LIGLRGIVVK
SHGSANEIAF TCAIEHAIQE TQWQIPASIS KKLETVLSER DDLSHE