Gene Ping_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1084 
Symbol 
ID4625378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1356155 
End bp1356676 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content37% 
IMG OID639796300 
Producthypothetical protein 
Protein accessionYP_942522 
Protein GI119944842 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.181417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACG TTAAATTACC GATAATGGTT GATCCTGTTA GAGCTGCACA AAATCAGTTG 
GAGTTAGACG CTATAATTCC AAAAGCGCTT TTGAGCAGAT TAGCAGAGTC AACAATCAGT
ATTCAGTCTG ATATCAAGAC TGCTTTTTCA TTTGATATTG ATAAGCAAAA GCTAAGAATA
TTTAATGGTA AAGCCAGTGT TGCAGTAGAG CTTATTTGTC AACGGTGCAA TGAGCCTATG
ATTTATCAGT GTGAAGCTGA ATTTAAATAC TGTCCTGTTC ATAACCAAGA ACAGGAAAAT
AATTTACCTG ACGCCTACGA AGCCATTTAT TATGATGAAA ATGGTGAGGT GAATCTTCAT
CAAGTTGTAG AAGATGAACT GATAGTGACT CTTCCGCAAA TTGCAAAACA TGCAATTGAA
GAATGTCAGC AAAGTAAGTT TGAACTTACC TTTGGTGAAG TTGATGAAGA GAAACAGCGT
CCCAACCCAT TTGATGCTCT AGCTCAATTA AAGCACAAGT AA
 
Protein sequence
MQNVKLPIMV DPVRAAQNQL ELDAIIPKAL LSRLAESTIS IQSDIKTAFS FDIDKQKLRI 
FNGKASVAVE LICQRCNEPM IYQCEAEFKY CPVHNQEQEN NLPDAYEAIY YDENGEVNLH
QVVEDELIVT LPQIAKHAIE ECQQSKFELT FGEVDEEKQR PNPFDALAQL KHK