Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1080 |
Symbol | |
ID | 4625374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 1351088 |
End bp | 1351630 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639796296 |
Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
Protein accession | YP_942518 |
Protein GI | 119944838 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000078016 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACT TAATATCTAT TTTTCTGCTC TTTCTTAGCT TCTCTGTATT TTCAGACGAA AATCCAACTG TTTTAATGGA AACATCCCAA GGCCCCATTA TTATTGAATT GTATCCAACA CTAGCCCCCA AAACAGTGGA CAATTTTTTA AAATATGTAC AAACAGATGG TTTTAAGCAA ACTACCTTCC ACCGTATTAT TAATAATTTT ATGATCCAGG GAGGAGGTTT TGAGGTGTCT GGAAAAAAAG CGGTCACTTT TGCAGCAATA GAGAATGAAT CCCGCAATGG TTTAAGCAAC AAACGCGGCA CCATTGCCAT GGCAAGAACC AACAATCCGC ATTCTGCCAC TCGCCAATTT TTTATTAATC ACAATGATAA TCATTTTTTA GATGCACAAG ATGAACGCTG GGGTTACAGT GTATTCGGCA AAGTGATTAA AGGGATGGAG GTTGTCGATA AAATAGCAAT GGTCAAGACA GGCGCTGGCG ATAAACCCAT TCAGACTGTT ATTATTAATC GCATCTCAGC AGGTAAAAAA TAA
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Protein sequence | MKHLISIFLL FLSFSVFSDE NPTVLMETSQ GPIIIELYPT LAPKTVDNFL KYVQTDGFKQ TTFHRIINNF MIQGGGFEVS GKKAVTFAAI ENESRNGLSN KRGTIAMART NNPHSATRQF FINHNDNHFL DAQDERWGYS VFGKVIKGME VVDKIAMVKT GAGDKPIQTV IINRISAGKK
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