Gene Ping_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1047 
Symbol 
ID4623907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1319803 
End bp1320615 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content40% 
IMG OID639796263 
Productdimethyladenosine transferase 
Protein accessionYP_942485 
Protein GI119944805 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.503056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATA AAACACACTT AGGTCATACC GCGCGTAAAC GTTTTGGACA AAACTTCTTA 
CACGATGATT ATATTATTGA TTCTATTGTT GGGGCGATCG CACCTCAATG GGAAGACAAC
ATCGTTGAAA TAGGCCCGGG CTTAGGCGCA CTAACAGAGC CGGTTGCAAG TAAAGTGAAG
TGCTTAAATG TCATTGAGCT CGATAGAGAT TTGGCTGCCC GTTTAGCAGA GCATCCCGTA
TTAGGTGATA AATTAAATAT TACCCAAGCC GATGCGCTAC AATTTGATTT TGGAAAGTTA
GCCAGTACAG AAAGACCACT GCGCGTTTTT GGTAACTTGC CCTATAATAT TTCAACACCG
CTGATGTTTC ATTTGTTCGA ATATGCAGAC AAAATTTCTG ATATGCATTT TATGCTCCAA
AAAGAAGTGG TTAATCGTCT CTGTGCAGGT CCGAACTGTA AAGCCTACGG ACGCTTAACC
GTTATGGCCC AATATTATTG CCGCATTATT CCTGTATTAG AAGTACCACC GACGGCTTTT
AAACCGGCTC CTAAGGTTGA TTCAGCTGTT GTACGTTTAG AGCCCTATGA CACCCCACCC
TTTATCGCTA AAAGCTTAAA ATGCCTTACC CAAGTGTGTT CCATGGCCTT TAATCAACGC
CGTAAAACAA TTCGTAATGG TTTGCGTGAT TTGTTAAGTA TTGAACAATT ACAAGAAATT
GGCATTGATA CAACCAAACG GGCAGAAAAT ATCAGCGTTG AAGAGTACGT TAATATTGCC
AATTATGTGT TTGATTTAAA AGAAAATAAA TAA
 
Protein sequence
MNDKTHLGHT ARKRFGQNFL HDDYIIDSIV GAIAPQWEDN IVEIGPGLGA LTEPVASKVK 
CLNVIELDRD LAARLAEHPV LGDKLNITQA DALQFDFGKL ASTERPLRVF GNLPYNISTP
LMFHLFEYAD KISDMHFMLQ KEVVNRLCAG PNCKAYGRLT VMAQYYCRII PVLEVPPTAF
KPAPKVDSAV VRLEPYDTPP FIAKSLKCLT QVCSMAFNQR RKTIRNGLRD LLSIEQLQEI
GIDTTKRAEN ISVEEYVNIA NYVFDLKENK