Gene Ping_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1046 
SymbolapaH 
ID4623906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1318970 
End bp1319800 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content41% 
IMG OID639796262 
Productdiadenosine tetraphosphatase 
Protein accessionYP_942484 
Protein GI119944804 
COG category[T] Signal transduction mechanisms 
COG ID[COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 
TIGRFAM ID[TIGR00668] bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.78168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTACCT ATATAGTGGG TGATGTCCAC GGCTGCTTCG ATGAACTTCA AGCTTTGCTT 
GAACTCGCGC AATTTAAAAA AAATAAAGAT CAGCTTTGGA TAACCGGCGA TCTTGTCGGA
CGGGGTCCAA AATCGCTGGA AACATTACGT TTTGTTAAAA GCTTAGGTGA CAGTGCGAAG
ATTGTACTGG GTAATCATGA TCTGCATCTT TTGGCCATTC ATCAAGGTAT CCACAGTGAT
AAAGAAAGTG ATAAATTAAG CGCATTATTA AATGCGCCAG ACTGTGATGA ATTACTGACT
TGGTTGCGTT TTCAACCGCT TTTTAGACGC CATCCTGAAT TTAACTTTGT GATGGTTCAT
GCGGGCATAT CCCCACAGTG GACTATCCAA CAAGCGCAAG GTTATGCTCA AGAAGTACAA
AACATTTTGC AGGGTAATGA ATTTAAAAAA CTGCTTAAAA ACATGTATGG CAACCACCCT
GCCTCATGGA ATGATAGTTC ACAGGGTATT AAGCGGTTAC GTTTTATTAT TAACGCATTA
ACCAGAATGC GTTATTGCCT GTTAGACGGG TCATTAGAAT TTTATAGCAA ACTTGCCCCT
GAGCAAACCG ATAGCACTAT CATTAAACCC TGGTTTGAAA TTAACACGTT GGATCAGAGT
AGTGACATCA TCTTTGGCCA TTGGGCGGCG TTATTAGGCA CGGGGACTAA ACAGGGAATT
TATGCTTTAG ATACCGGATG CGTCTGGGGA AATAGCCTGA GTATGTTACG TTGGCAAGAT
AAAAAAATGT TTTCTTTTGC TTGCCAACGC CAGAGAGTTC ACAGTAAATA A
 
Protein sequence
MATYIVGDVH GCFDELQALL ELAQFKKNKD QLWITGDLVG RGPKSLETLR FVKSLGDSAK 
IVLGNHDLHL LAIHQGIHSD KESDKLSALL NAPDCDELLT WLRFQPLFRR HPEFNFVMVH
AGISPQWTIQ QAQGYAQEVQ NILQGNEFKK LLKNMYGNHP ASWNDSSQGI KRLRFIINAL
TRMRYCLLDG SLEFYSKLAP EQTDSTIIKP WFEINTLDQS SDIIFGHWAA LLGTGTKQGI
YALDTGCVWG NSLSMLRWQD KKMFSFACQR QRVHSK