Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1029 |
Symbol | |
ID | 4624172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 1297829 |
End bp | 1299361 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639796245 |
Product | histidine ammonia-lyase |
Protein accession | YP_942467 |
Protein GI | 119944787 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0827766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACGAAT TACATATTAA ACCGGGACAA TTAACACTTT CTCAACTGCG TAAAATCAGC CGTCATGCGC TTAAAGTCAG CTTAGAATCA AGTTGTATTG AGGCCATTCA TGCCAGTACA CAAGTTGTCA ATCAAGTGAT TGCAGAAAAT AGGGTTGCTT ATGGTATTAA TACCGGTTTT GGTTTGCTGG CTAATACTCG AATCGCCCCG GAAGACTTGG AAACACTGCA GCGCAGTATT GTCCTTTCCC ATGCGGCGGG TATCGGCGAA TTGATGAATG ATGAAACCGT GCGGATGATG ATGGTATTAA AAATCAACAG TCTGGCGCGG GGTTTTTCAG GGATTCGTTT ATCTGTTATT GAAGCATTAA TGACACTGGT AAATGCACAG ATTTACCCTT GTGTGCCCAA AAAAGGGTCA GTGGGTGCAT CGGGTGATTT AGCACCATTA GCACACATGA GTACGGTGTT ACTAGGTGAA GGTGAAGCGC GTTATCAGGG AAACATAATT TCAGGTGCAA AAGCGTTAGA AATTGCCGGC ATGCAGCCTA TTACTTTGGC TCCTAAAGAA GGACTCGCAT TATTAAACGG TACTCAGGCA TCCTGTGCTT TTGGCCTGGA AGGGCTATTT GCCGCTGAGG ATCTGTTCGC TTCTGCCACT TTATGCGGCG CAATGACGGT CGATGCCGCA TTAGGCAGCC GTCGTCCCTT TGATGACCGG GTACATCAAG TACGCGGTCA TCAATCACAA ATAGATTCAG CTTTAATCTA TCGTCATATA CTCGATACAC ACAGTGAAGT AAGTCATTCA CATACAGCCT GTGAAAAAGT GCAGGATCCC TACTCTCTTC GCTGTCAGCC CCAGGTAATG GGGGCCTGTT TACAGCAAAT TCGTAATTCT GCCGCTATTT ATGAAATTGA AGCAAATTCT GTCTCGGATA ATCCGCTGGT CTTTGCCGAG GATGGTGATA TTATTTCTGC CGGTAATTTC CATGCTGAAC CTATTGCTAT GGCCAGTGAT AATTTAGCCT TAGCCATTGC TGAAATTGGC AGTTTATCTG AACGCCGTAT GGCATTGTTA ATTGACAACA GTTTAAGTAA ATTACCGCCC TTTTTGGTCA ATAACGGCGG CGTTAACTCC GGCTTTATGA TTGCTCAGGT AACGGCAGCG GCGCTTGCCA GCGAAAATAA ATCCCTCGCT CACCCGGCCT GTGTGGACAG CCTGCCAACA TCGGCCAATC AGGAAGATCA CGTTTCAATG GCAACCTTTG CCGGTCGGCG CTTAAAAGAG ATGGCGGAAA ACACCCGCGG TATTTTAGCG GTGGAGTTAT TGGCCGCAGC CCAGGGGCTG GATTTTAGAT CCCCGTTAAA ATCCTCTGAA TTAATAGAAA CAGCCAAGGC TGAATTACGG GAGCGGGTTG ATTTTTATGA TAAAGACAGA TATTTCGCAC CCGATATTAA ACAGGCAAAT CAGTTGTTAA TTGAAGCCAT GCATAACAAA CTGATCCCGG AAGGTTTACT GCCGAGCCTT TAA
|
Protein sequence | MYELHIKPGQ LTLSQLRKIS RHALKVSLES SCIEAIHAST QVVNQVIAEN RVAYGINTGF GLLANTRIAP EDLETLQRSI VLSHAAGIGE LMNDETVRMM MVLKINSLAR GFSGIRLSVI EALMTLVNAQ IYPCVPKKGS VGASGDLAPL AHMSTVLLGE GEARYQGNII SGAKALEIAG MQPITLAPKE GLALLNGTQA SCAFGLEGLF AAEDLFASAT LCGAMTVDAA LGSRRPFDDR VHQVRGHQSQ IDSALIYRHI LDTHSEVSHS HTACEKVQDP YSLRCQPQVM GACLQQIRNS AAIYEIEANS VSDNPLVFAE DGDIISAGNF HAEPIAMASD NLALAIAEIG SLSERRMALL IDNSLSKLPP FLVNNGGVNS GFMIAQVTAA ALASENKSLA HPACVDSLPT SANQEDHVSM ATFAGRRLKE MAENTRGILA VELLAAAQGL DFRSPLKSSE LIETAKAELR ERVDFYDKDR YFAPDIKQAN QLLIEAMHNK LIPEGLLPSL
|
| |