Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0989 |
Symbol | |
ID | 4626578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1248602 |
End bp | 1249282 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639796206 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_942428 |
Protein GI | 119944748 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00421455 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.304991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAC AGAAAATAGT GTTAATCACA GGTGCATCCA GCGGTATCGG TAAAGCCACA GCCAAAACGT TAGTCAAAAG TGGACATAAG GTAATACTGA CCGCCCGCAG ACAAGAAAAA TTGGATAAAC TGGTAGCAAT GCTAGGGGAA GATAACGCTC TGGCTGTTGC CGCCGATGCC ACCCAATTTG ATGCATTAGA AAAGGTAGTA AAAGCTGGCA TCAACAAGTT TGGCAGACTG GATGTGGCCT TCGCTAACGC GGGCACCGGA ATATCCATTT CAGGTACAGA ACAGGGAGAT CCAGATGAGT GGTCAAAACT GATCGATATC AACATCAAAG CCTTGTTATG GACGGCCAAG TTAACTCTAC CCAACTTGCG TGAGACCAAG GGGCATTTTA TTTTAACCAG CTCAGTGGCC GGGCGTACGG CACATAAAGG TTCCATTTAC GGTGCCAGTA AATGGTTTGC TTATGGCTTT GGTCAGAACT TGGCTGAAGA AATGGCTCAA TGGGGCGGAC GCTGCACCAC CATTGCCCCT GGCATGGTCA ACACTGCGTT TTTTGATGAG CCTAAACCCG ATAAATTAGA CCCGGTTGAT GTCGCTGAAG CGGTACTATT TGCTATTGAA GCTGAGCAGC GTTGTAATGT GCGTGAAATC TTTCTGATGC CAACCCACTA A
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Protein sequence | MTKQKIVLIT GASSGIGKAT AKTLVKSGHK VILTARRQEK LDKLVAMLGE DNALAVAADA TQFDALEKVV KAGINKFGRL DVAFANAGTG ISISGTEQGD PDEWSKLIDI NIKALLWTAK LTLPNLRETK GHFILTSSVA GRTAHKGSIY GASKWFAYGF GQNLAEEMAQ WGGRCTTIAP GMVNTAFFDE PKPDKLDPVD VAEAVLFAIE AEQRCNVREI FLMPTH
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