Gene Ping_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0954 
Symbol 
ID4626666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1199244 
End bp1199672 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content36% 
IMG OID639796172 
Productuniversal stress protein 
Protein accessionYP_942394 
Protein GI119944714 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.377929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATA AACATATATT AGTTGCAGTT GATTTATCTA AATCAAGTGA GAAAGTGATC 
AGTAGGGCTG TCTTGTTGGC TAAAGATACA AACGCTAAAG TTTCACTTAT TTTTGTCGAC
GTAGATAACG TATCTAACAT TGGACTTGTG AATTTAGAAA TTGATAGCCT GCCTTCTATT
GAGGAAAGAG AGAAAACATT ACAACAAGAC CTGCAGGCCT TAGCTGTTAA AGCTGATTAT
CCTATTGAAA ATGCCATTAT AGTAATGGGA AATTTTAACC GCAGGGTAAA CGCAGCCGTT
GAAAAAATAG GTGCTGACCT ATTGGTTTGT GGGCATCACC ATGATTTTTG GAGTCGATTA
CTATCAGCCA CACGTAAAAT ACTTAATTCG ACAACTACCG ATCTATTAAT TATTTATCTT
GATAGCTAA
 
Protein sequence
MSYKHILVAV DLSKSSEKVI SRAVLLAKDT NAKVSLIFVD VDNVSNIGLV NLEIDSLPSI 
EEREKTLQQD LQALAVKADY PIENAIIVMG NFNRRVNAAV EKIGADLLVC GHHHDFWSRL
LSATRKILNS TTTDLLIIYL DS