| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0893 |
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| Symbol | |
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| ID | 4624381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1117964 |
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| End bp | 1120045 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639796097 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_942334 |
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| Protein GI | 119944654 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.409319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.933748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGAAT TACTGCCAGG TAAAACCCAT CCTATCGGTG CCACGGTGGA GGATGGGGGG
GTTAATTTTT GCCTCTATTG TGATGAACGA TCAACCTCCG TCGAGCTGCT TCTGTTTGAA
CAGCATAATG CGCTTGAACC TTACGAGATT ATCCGGTTCG ATCCCCTGAT TCATCGTAGC
TTTTATTTTT GGCATATTTT TGTAAAGGGT TTACCGGAAA AAACACATTA TGCTTACCGT
GTTGGTGGCC CTTTTCAACC TGAAAACGGG CTGGTTTTTG ATCCGCAAAA AGTATTAATT
GATCCCTACT CAAAAGGTAT TAATTGTAGT TTATGGCAGC GAAATGATGC CTGCAAAGCG
GGTGATAATC TGCACACTTC GATGCGCAGT TGCGTACTCA AGCTAACGGA TTATGACTGG
CAGGGTGATA GCCCTCCTAA TCATCATCTC AATGAAAGTA TTATTTATGA GATGAATGTC
GGCGGATTTA CTAAATCACC GACCTCCGGG GTAAAACATC CGGGTACCTA TGCAGGCATA
ATAGAAAAAA TACCCTATTT AACAGCATTA GGTATTACGG CGGTAGAGTT GTTACCCATA
TTTGAATTTG AAGACTCTGA GGTGCGTTAT TTTAATGGCA ATAAATTAGT TAATTATTGG
GGATATAGCA CCATTAATTT TTTTGCACCG CATTCGGGGT ACTGTGTCAA TCCACAGGAA
GGTAACCACC TTGATGAATT TAGAGATCTC GTTAAGGCGC TACACCAGGC TGATATTAGT
GTGATTCTGG ATGTTGTTTT TAACCACACC GATGAAAGTG ATCATCGAGG GCCAGTTTAC
TCTTTTAAAG GTTTTGCTAA TAATAGCTAT TATTTTTTAA TGGATAAGCA TAAAAATTTT
TACTGTAATT ATTCTGGATG CGGTAATACT TTTAAATGCA ACCATCCTAT TGGTGAAAAA
TTTATTGTTG ATTGTTTAGA ATATTGGGTG CGGGATATGC ATGTCGATGG TTTTCGTTTT
GACGAAGGCA CTATCTTAGC ACGTGGGGAT AACGGTAATT TAATTGCCAA TCCTCCCGTT
GTTTGGGCTA TCGAATTATC TGAACAATTA GCCGATACTA AGGTGATTGC AGAAGCTTGG
GATGCGGAGG GAGGATATCT GGTGGGATCT TTCCCCGGAC ATCGTTGGGC GGAGTGGAAC
GGTCTTTATC GAGATGATCT GCGTGATTTT GTGCGCGGTA AAGCGGGTAT GCTGGGCACG
TTTGCCCGGC GTATTACCGG CAGTGCCGAT ATCTACGAGT CCCAATATGA ATTACCCGGT
AACAGTATTA ATTTTATTAA TTCCCATGAT GGTTTTACCC TTAATGATCT TGTGTCCTAT
AACCATAAAC ATAATCAGGC GAATGGGGAA AATAATAGTG ATGGTATTGA TAATAACAGA
AGTTGGAATT GTGGTGTTGA GGGTATAACC GATAATCCAC AAATCAATAT GCTGCGCAAG
CGACAAATCA AAAATTTTGC CGCTATTTTA ATGTTATCCA AAGGTGTCCC GATGTTTGTT
GCAGGCGATG AAATTTGCAG AACACAACAG GGAAACAATA ATGCTTATTG TCAGGATAAC
GAACTATCCT GGTTCAATTG GCAGGATGTT GATACCAATA AGTCTATGCT GCAGTTCTGG
CAACGGCTGA TCGCTTTTCG TAAAGTTCAC CCGCGTTTAT TTCGCAATAA ATATTACAAT
AGTGAAATAA ACAAGAGTGG ATTATCCGAT ATATTATGGC ATGGATGTGA ACTGGGGAAA
CCTGGTTGGT ATGACCCAAG CGGGCTGGCA TTAGCGATGA CACTTGGAGA ACGGGCCGAC
GGGGAAGATA TACATATTAT GTTTAATATG TATTGGGAAG GACTTGAATT TGAGTTGCCG
GATATTGAAG GAGAGAAGTG GTATCGCGCC ATTGATACAT TCTTATCCTC TCCTTTAGAT
ATCGCTAAAA CCGGGGAGGA AATAGTGCAT AGCGGTTCGC ATTATAAAGT GAATGCGCGC
AGTGTTGTTG TCTTAATTTC AAAAAAAGAT CCGATCTGCT AA
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| Protein sequence | MYELLPGKTH PIGATVEDGG VNFCLYCDER STSVELLLFE QHNALEPYEI IRFDPLIHRS
FYFWHIFVKG LPEKTHYAYR VGGPFQPENG LVFDPQKVLI DPYSKGINCS LWQRNDACKA
GDNLHTSMRS CVLKLTDYDW QGDSPPNHHL NESIIYEMNV GGFTKSPTSG VKHPGTYAGI
IEKIPYLTAL GITAVELLPI FEFEDSEVRY FNGNKLVNYW GYSTINFFAP HSGYCVNPQE
GNHLDEFRDL VKALHQADIS VILDVVFNHT DESDHRGPVY SFKGFANNSY YFLMDKHKNF
YCNYSGCGNT FKCNHPIGEK FIVDCLEYWV RDMHVDGFRF DEGTILARGD NGNLIANPPV
VWAIELSEQL ADTKVIAEAW DAEGGYLVGS FPGHRWAEWN GLYRDDLRDF VRGKAGMLGT
FARRITGSAD IYESQYELPG NSINFINSHD GFTLNDLVSY NHKHNQANGE NNSDGIDNNR
SWNCGVEGIT DNPQINMLRK RQIKNFAAIL MLSKGVPMFV AGDEICRTQQ GNNNAYCQDN
ELSWFNWQDV DTNKSMLQFW QRLIAFRKVH PRLFRNKYYN SEINKSGLSD ILWHGCELGK
PGWYDPSGLA LAMTLGERAD GEDIHIMFNM YWEGLEFELP DIEGEKWYRA IDTFLSSPLD
IAKTGEEIVH SGSHYKVNAR SVVVLISKKD PIC
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