Gene Ping_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0885 
Symbol 
ID4625223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1109424 
End bp1110155 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content46% 
IMG OID639796088 
Producthypothetical protein 
Protein accessionYP_942326 
Protein GI119944646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00376266 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.82924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAAA AGAGCAACAA CAGTTTTTTG TCTATAATCG CAACCACGGG CAAAGATCTG 
GTCGCAATGT TAAGAGATGC GATGCTGCTG TTAATAGTTG TCCTGTTAAT CGGGTGGCCA
AAAACCGTCA ACAACATTCT TGTAGAAGCG GGATTTGAAG AAGGAAGCTT TGCAGGATTG
AAATGGAAAG CTAAATTGAC CCAATCAGAT GAAACCCTTC TAAAAGCCCA AGCGACCATT
GCTGATCTAA TAGCGCAGAA TGAAAAACTG AATAGCGCGC TCTCTGAAGT TAATTCCCGG
ACAGACAGTG CTGAGGTTAA AGCGAACATA ACGAAACTTA ATAAACTCAA CACCTACTTA
GCGGCCAGTT CGGCGAAAGT TCAAGCAGCC GCAGAAACAA CTACCTCGGC GAATGCCGCT
TTGATTCAGA AAGCACAAAG CGACACAGGA ATAGTTGTTA CCTGGGGGGT TGTCTATAGC
GGTGATCGCA CTCTAGAGGC TGCGCAGTAT GAGGTTCAAA CAATCGCTCC GAAATTAGGA
TTAACAAACG CAGCAGTCTA TTTCCGACAA GATTCTTACC GCAGTGTCGC AACAGTTACC
GACAGATTAT ACGCGGAGCA GCTTCTTAAG AAGGCAAATG AGCGCCGAAA GGACTCGTAC
ATTGTCAATA TGTCTCACTG GTGTCCAAAC ACAGCGGAAA AGGACGGCTA TTTTGAGTGC
TCAATTCCCT GA
 
Protein sequence
MPEKSNNSFL SIIATTGKDL VAMLRDAMLL LIVVLLIGWP KTVNNILVEA GFEEGSFAGL 
KWKAKLTQSD ETLLKAQATI ADLIAQNEKL NSALSEVNSR TDSAEVKANI TKLNKLNTYL
AASSAKVQAA AETTTSANAA LIQKAQSDTG IVVTWGVVYS GDRTLEAAQY EVQTIAPKLG
LTNAAVYFRQ DSYRSVATVT DRLYAEQLLK KANERRKDSY IVNMSHWCPN TAEKDGYFEC
SIP