Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0885 |
Symbol | |
ID | 4625223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1109424 |
End bp | 1110155 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639796088 |
Product | hypothetical protein |
Protein accession | YP_942326 |
Protein GI | 119944646 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00376266 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.82924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGAAA AGAGCAACAA CAGTTTTTTG TCTATAATCG CAACCACGGG CAAAGATCTG GTCGCAATGT TAAGAGATGC GATGCTGCTG TTAATAGTTG TCCTGTTAAT CGGGTGGCCA AAAACCGTCA ACAACATTCT TGTAGAAGCG GGATTTGAAG AAGGAAGCTT TGCAGGATTG AAATGGAAAG CTAAATTGAC CCAATCAGAT GAAACCCTTC TAAAAGCCCA AGCGACCATT GCTGATCTAA TAGCGCAGAA TGAAAAACTG AATAGCGCGC TCTCTGAAGT TAATTCCCGG ACAGACAGTG CTGAGGTTAA AGCGAACATA ACGAAACTTA ATAAACTCAA CACCTACTTA GCGGCCAGTT CGGCGAAAGT TCAAGCAGCC GCAGAAACAA CTACCTCGGC GAATGCCGCT TTGATTCAGA AAGCACAAAG CGACACAGGA ATAGTTGTTA CCTGGGGGGT TGTCTATAGC GGTGATCGCA CTCTAGAGGC TGCGCAGTAT GAGGTTCAAA CAATCGCTCC GAAATTAGGA TTAACAAACG CAGCAGTCTA TTTCCGACAA GATTCTTACC GCAGTGTCGC AACAGTTACC GACAGATTAT ACGCGGAGCA GCTTCTTAAG AAGGCAAATG AGCGCCGAAA GGACTCGTAC ATTGTCAATA TGTCTCACTG GTGTCCAAAC ACAGCGGAAA AGGACGGCTA TTTTGAGTGC TCAATTCCCT GA
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Protein sequence | MPEKSNNSFL SIIATTGKDL VAMLRDAMLL LIVVLLIGWP KTVNNILVEA GFEEGSFAGL KWKAKLTQSD ETLLKAQATI ADLIAQNEKL NSALSEVNSR TDSAEVKANI TKLNKLNTYL AASSAKVQAA AETTTSANAA LIQKAQSDTG IVVTWGVVYS GDRTLEAAQY EVQTIAPKLG LTNAAVYFRQ DSYRSVATVT DRLYAEQLLK KANERRKDSY IVNMSHWCPN TAEKDGYFEC SIP
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