Gene Ping_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0812 
Symbol 
ID4623910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1015169 
End bp1016002 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content42% 
IMG OID639796011 
Productdihydropteroate synthase 
Protein accessionYP_942254 
Protein GI119944574 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.346679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00737464 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGTTAA TAAGCGGCAG TAAAATACTT GATTTGAGCG AGCCTAAGGT AATGGGGATT 
TTAAATGTCA CGCCTGATTC TTTCTCCGAT GGGGGGCGTT TTTCGAATAT CGATAATGCC
CTTAAGCAAG CTCAAAAAAT GCTTGAGCAG GGGGCCAGTA TTTTGGATAT CGGTGGTGAG
TCGACTCGCC CGGGGGCAAT CGATGTGAGC GAACAGCAGG AGCTGGATCG TGTTATACCG
GTCATTGAAC AAATAAATCA AGAGTTTGAT TGTTGGATTT CTATTGATAC AAGCAAAGCT
AATGTGATGC AGGCAGCCGT TAATGCGGGT GCAGACTTGA TTAATGATGT TAGGGCACTA
CGCGAAGATA ATGCGCTGGA TGTTGCGGTT AACGCTAATG TGCCAGTGTG TCTGATGCAT
ATGCAGGGTC AGCCAAGAAG CATGCAAAGC GCCCCTGAAT ATGAAAATGT CATTGAAGAG
GTAAAAACTT TTTTGTTACA ACGTGCTGAA ATTTGTATTA ATGCCGGCAT CAAAAAAGAA
AATATTATTT TAGATTTGGG TTTTGGTTTT GGTAAGCAAC TCAACGATAA TTATGAGTTA
CTGGCTGCCA CGGATCAATT TGTTAAATTA AATTATCCTA TTTTGACCGG CCTCTCTAGA
AAGTCCATGT TTGGGCAATT GCTGAATCGT GATGTAACTC ACCGCCTCGC CGGCAGTCTT
GCCGGAGCTT TAATCGCTCT GCAGCAAGGG TCGCAAATTA TTCGTGTGCA TGATGTTGCA
GAAACCGCCG ATGTTATTAA AGTATTACAA ACCGTAAACG CTTTTAAAAA ATAA
 
Protein sequence
MQLISGSKIL DLSEPKVMGI LNVTPDSFSD GGRFSNIDNA LKQAQKMLEQ GASILDIGGE 
STRPGAIDVS EQQELDRVIP VIEQINQEFD CWISIDTSKA NVMQAAVNAG ADLINDVRAL
REDNALDVAV NANVPVCLMH MQGQPRSMQS APEYENVIEE VKTFLLQRAE ICINAGIKKE
NIILDLGFGF GKQLNDNYEL LAATDQFVKL NYPILTGLSR KSMFGQLLNR DVTHRLAGSL
AGALIALQQG SQIIRVHDVA ETADVIKVLQ TVNAFKK