Gene Ping_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0808 
Symbol 
ID4626381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1011128 
End bp1011607 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content39% 
IMG OID639796007 
Producttranscription elongation factor GreA 
Protein accessionYP_942250 
Protein GI119944570 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.350185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0132742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAAT ATCCAATGAC AGCTAATGGT GCTGCTAAAT TACGCAGTGA ATTAAAGCAG 
TTAAAAACAG TCACTCGTCC TCGTATTGTT AAGGCAATTG CGGAGGCTCG TGAGCACGGC
GATTTAAAAG AAAATGCGGA ATATCACGCG GCGCGCGAAC AACAAGGTTT TTGTGAAGGA
CGTATTCAGG ATATTGAAGC TAAATTATCC AATGCACGCA TTATTGATAT CACTAATATA
ACCAATAATG GCAAGGTTAT TTTTGGCGCT ACGGTCACTA TTGTGAATGT CGAGACCGAT
GCAGAAGTGA CTTATAAAAT TGTTGGTGAT GACGAAGCTA ATATAAAAAT AAATTTGATT
TCTGTTAGTT CTCCGCTTGC TCGTGGTTTG ATTGGCAAAA CGCTAGATGA TGAAATCTCC
ATCGTCACAC CGGGTGGTAC TATTGATTAT GAAATTATCA GCGTTCAATA TATTGCCTGA
 
Protein sequence
MVQYPMTANG AAKLRSELKQ LKTVTRPRIV KAIAEAREHG DLKENAEYHA AREQQGFCEG 
RIQDIEAKLS NARIIDITNI TNNGKVIFGA TVTIVNVETD AEVTYKIVGD DEANIKINLI
SVSSPLARGL IGKTLDDEIS IVTPGGTIDY EIISVQYIA