Gene Ping_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0802 
Symbol 
ID4626375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1004183 
End bp1004452 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content36% 
IMG OID639796002 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_942245 
Protein GI119944565 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00209156 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATAT TAGTACGTAA CCTTGCTGCG GCAACCACTG AAGAAAAATT AAACAGCTTA 
TTTATAGAAT ATGGCACCGT GCAGTCTTGC AGCTTAGTAC TTGATAAAGT AACAGGAAAA
TCCAAGGGTT TTGGTTTTGT AGAAATGCCA AAAGTTGGCG AAGCAAAAGC GGCGATGAAA
ACATTAAACG GTTATAAATT AGCCGGTAAT TTTATTCGAG TAAAAAAAGC AGAATCTAAA
GTCGAAGCGA CCGAAGAGAT TAAAGAATAA
 
Protein sequence
MKILVRNLAA ATTEEKLNSL FIEYGTVQSC SLVLDKVTGK SKGFGFVEMP KVGEAKAAMK 
TLNGYKLAGN FIRVKKAESK VEATEEIKE