Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0786 |
Symbol | |
ID | 4626494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 986439 |
End bp | 987563 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639795987 |
Product | transposase, IS4 family protein |
Protein accession | YP_942230 |
Protein GI | 119944550 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5433] Transposase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0609195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00199568 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCCAAA TAACCTTGAT AAAGCAGCTC TCAATCATCC GTGATACCCG ACAACCGAGG AAAGTGCATC ACAATTTAGT TGATGTTTTA TTTTTGGCAA TTACAGCCGT CATATCAGGC TGTGAGGGTT GGGAAGAAAT ACAAGATTTC GGCAACGATA AGTTAGATTG GCTGAGAAAG TATTTACCCT TTTCAGGCGG AATACCTACG GATGACACAA TTTCTCGTGT TTTTCAGTTG ATTGACCCAA AAGAATTTCA AAAGTGCTTT GCTACTTGGA TGAAAAGTTG CTGTGAAATG AGTCATGGAG ATGTCATTGC CATTGATGGA AAAACATTAA GAGGTTCATT TAATAAGAAA GATAAATCAG ATACTATTCA TATGGTTAGC GCTTTTGCAG CCGCTAATTC GGTTGTGTTA GGGCAAGTTA AGACAAATGC TAAGTCTAAT GAAATTACAG CGATTCCTAA GTTATTAGAT TTATTGGATG TACGTGGATG CCTCGTAACT ATTGATGCAA TGGGATGCCA AACTAAAATA GCTAAAAAAA TCGTAGATAA AGGTGGTGAT TATCTTTTGC CTGTTAAAGA TAACCAAGAA CGATTACAAA CAGCATTAGA CGGTATATTT TCAATTCGCC GATTAGAGTT ACCAGAAACA GAAGCCTATA CGACTAAAGA AAAAGGTCAT GGTCGAGAAG ATAGCAGGAT GTGTATGGTT GCAGATGCTA ACGAAATTGG TGACTTAGTT TTTGAATGGC CAGGCTTAAA AACGCTTGGG TATGTTGTCT CGTTTAGAAC TGAGAAAGAT ATGCAAACAA CTATAGCAGT TAAGTTTTAT ATCAGTTCAG CAAAACTAGA TGCTAAGTCT CTATTAGAGG CATCAAGAGC GCATTGGACT GTGGAAAATA ACTTGCATTG GCAACTTGAT ATTTCTATGA ATGAAGACTC ATGTCGTATT CGCCAGCAGA ATTCAACAGA AAATATAGCA ACTGTGCGAC ATACAAGCTT GAACTTGTTA AAGAATGAAA AGTCTTTCGA TGGTGGTATC AAGAGAAAGC ATAAACAAGC AAATCGCAGT GATAGTTACC GAGAACTAGT TGTTTCAGGA CTTTCGTTTT TATAA
|
Protein sequence | MSQITLIKQL SIIRDTRQPR KVHHNLVDVL FLAITAVISG CEGWEEIQDF GNDKLDWLRK YLPFSGGIPT DDTISRVFQL IDPKEFQKCF ATWMKSCCEM SHGDVIAIDG KTLRGSFNKK DKSDTIHMVS AFAAANSVVL GQVKTNAKSN EITAIPKLLD LLDVRGCLVT IDAMGCQTKI AKKIVDKGGD YLLPVKDNQE RLQTALDGIF SIRRLELPET EAYTTKEKGH GREDSRMCMV ADANEIGDLV FEWPGLKTLG YVVSFRTEKD MQTTIAVKFY ISSAKLDAKS LLEASRAHWT VENNLHWQLD ISMNEDSCRI RQQNSTENIA TVRHTSLNLL KNEKSFDGGI KRKHKQANRS DSYRELVVSG LSFL
|
| |