Gene Ping_0774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0774 
Symbol 
ID4626515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp973302 
End bp974390 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content42% 
IMG OID639795977 
ProductCDP-glucose 4,6-dehydratase 
Protein accessionYP_942220 
Protein GI119944540 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02622] CDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0920711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTA GTTTTTGGAA AGATAAAAGA GTATTTATTA CAGGGCATAC TGGTTTTAAA 
GGAAGCTGGT TGTCATTATG GCTTCAGGAG ATGGGCGCTA TTGTTAAAGG TTATTCTTTG
TCTGTGCCCA CAACACCAAG CTTATTCGAA GAGGCCAATG TAAGTTTTGG AATGCTATCC
GAAGAAGGTG ATATACGAGA CTTTTTGCAT TTGCGAGAAA GCATTAGTTT ATTTAAGCCT
GAAATTGTTT TTCATATGGC TGCTCAGCCA TTGGTACGCT TGTCCTATGA TGAGCCGATG
GAAACCTATT CAACTAATGT AATGGGCACA GTTTACCTGC TCGAAGCTGT TAAGCAAGTC
GGTGGTGTAA AAGCTGTAGT GAACATCACT AGTGATAAAT GTTATGAAAA CCGCGAGTGG
ATATGGGGTT ATCGTGAAGA TGAAGCGATG GGGGGATATG ATCCTTATAG TAACAGCAAA
GGCTGCGCCG AGCTGGTTGC TTCATCTTAC CGCCAGTCTT TCTTTCATAA AGACAAATAC
CAAGAGCATG GTTGTGCACT TGCGTCTGTA AGAGCTGGTA ACGTGATTGG CGGTGGCGAT
TGGGCTGCTG ACCGATTAAT TCCTGATATG CTCAATGCTT TTTCAACTAA CAAGTCGGTT
GAAATTCGCA GCCCGCATGC GATTCGTCCA TGGCAGCATG TTCTTGAACC ATTATCAGGT
TATATCACAA TTGCAGAGCA TCTTTATGAA CAAGGTCCTG ATTTTGCGGA AGCTTGGAAT
TTTGGCCCCC GTGAAGAAGA TGCAAAACCT GTTCAGTGGA TTGTTGAAAA GTTAGTTGAA
CAATGGGGTG ATAAGGCGAG TTGGTATTTA AGTGACGGTG AGCATCCACA TGAAGCGCAT
TATCTGAAAT TGGATTGCTC AAAAGCAAAA GTACGCTTGG ATTGGCAGCC AGTCTGGAAT
CTAGAAGAAA CACTAAGTCG TATCGTAACA TGGCAGAAAG CTTGGCTTGA AGGTAAAGAT
ATCAAGCAGC ATACATTAAA CGAAATTAAA CAATATATGG CAATAAGAGC GGGAAATAAA
AATGTCTAA
 
Protein sequence
MNPSFWKDKR VFITGHTGFK GSWLSLWLQE MGAIVKGYSL SVPTTPSLFE EANVSFGMLS 
EEGDIRDFLH LRESISLFKP EIVFHMAAQP LVRLSYDEPM ETYSTNVMGT VYLLEAVKQV
GGVKAVVNIT SDKCYENREW IWGYREDEAM GGYDPYSNSK GCAELVASSY RQSFFHKDKY
QEHGCALASV RAGNVIGGGD WAADRLIPDM LNAFSTNKSV EIRSPHAIRP WQHVLEPLSG
YITIAEHLYE QGPDFAEAWN FGPREEDAKP VQWIVEKLVE QWGDKASWYL SDGEHPHEAH
YLKLDCSKAK VRLDWQPVWN LEETLSRIVT WQKAWLEGKD IKQHTLNEIK QYMAIRAGNK
NV