Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0763 |
Symbol | |
ID | 4626504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 959792 |
End bp | 962350 |
Gene Length | 2559 bp |
Protein Length | 852 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639795967 |
Product | polysaccharide export protein |
Protein accession | YP_942210 |
Protein GI | 119944530 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00148481 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.528442 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAATT TATGTCTATT ATTTTCAGCT TTAATGCTGC TTGTTGGGTC TTTTAATGCG CTGGCTGCTA CGCCAACGTC TGCGCAGATT CAACAGTTTA AAGCACTGCC AAGCGCGCAA CAAAATGCAC TGGCCTCGCA ATACGGCGTC AATATAGATG CTGTCACCGC GCCTCCTGCT GAAAATAGCG CAACGCCAGA TGCAGAGCCG ACAATAGAAG ATCGTACAAC AGAAGATCCT ACAACAACGG CCCAAAAAAC ACCAAGGGGT TTGAAGATGT TTGGTTATGA TCTGTTTGCC GGCGAACCCA TGTCATTGGC ACCCTTAAGC GATCTTCCTG TCCCGAATGA TTATTTGTTG GGGGTTGGCG ATGAGCTGCA AATCAAAGTG TTTGGTACAA AGACAGAAAG CTACAATTTA GTGATTAACC GCGAAGGCTC TATCCATATT CCAGACTTGG GACCTTTTCA GGCCAGGGGC TTAACTTATC AGCAGCTTAA AACAGAATTT ACAGCGTTAA TAAACCGCCG CATGATTGGT GTCGAAACCA GTATCAGCTT AGGTAAATTA AAAACAATGG AAGTTTTTGT GTTGGGGGCG GCTTATAAAC CTGGCAGTTA CGTCATTAGC TCATTATCTT CGGTCACTCA GGCAATAAAA GCTGCTGGCG GTATAGAGAG ATTAGGCTCT TTACGTGAGA TCCAGGTAAA GCGTAATAAT AAAATCATCA AAAAAATCGA TCTCTATGAT CTGTTAATTT CGGGTGATAC ATCCTCAGAT ATTTCACTCA AACAAGGTGA TGTTGTTTTT ATCCCAATCA AAAAGAAAAC CGTCAGTATT GATGGTTTTG TAAAACGGCC GGCGATTTAT GAATTAAAAA ATGAAAAAGA TATTGATAGC ATCCTTAAAC TTGCGGGCGG TTTAAACGCA AAAGCATACC CTGGCGTGCA AGTAACAAGA AGAACTCAAA TTGGCCGAGA TTTATATAAT TTCAACTTGG AAGATAAGCA GAGTAGTCAA ACATTTATAG TCGAAAATGG CGATCAGTTG AATGTTGGTG GCGTGACTGA TCTTTACCAT AATGCGGTCA GTGTTTCTGG TGCTGTTAGT TATGAAGGAG CCTATCAGTG GAATGCAGAC TTAACCGTCA GTGATTTAAT TACATCAATC AAATTCGATT TGAATAAAGA TGCTGATTTA CACAACGCGT TACTGGTGCG AGAAGTGGGT CTTGAGCATA ATATTAAAGT GCTGTATTTT GATCTGCTGG CTGCCATATC TAACCCTAAA AGTGACTTAG ATCTGAAGTT ACAGGCGCAA GATCAGCTCC TAATTTTAAA TAAAGAGACC GGAATTGCTG AAAAACTGGG TAAGAAAAGT AATTTATCCA AACAGATTGA TAATCAAGAG GTTAATGATC AATTCGTCAT CTCGGATTTA GGTGATAAAT CAAAACAGCA GAGCAGTGCA CAAGCCTTTA GAGCGGACCT GCTAAAACCT GTCATTGCGC AGTTAAAAGC GCAGTCTAAT TTTGAAAATG CAGTGCAAAT TGTTGATATT CGTGGCGCAG TTAAGTTCCC CGGTGTTTAC CCCTTATTTG AACATGCCGA TTTAAAAACG CTGATCAATC TCGCTGGCGG TTTAAAAGAG GCATCGTATT TGACGGCCGG TGAATTAAGC CGTATTAAGT TGATTGACGG TAAAGAGCGT ATTCATTATC AAACAATTGA TATTGCCAGT GCGATGAAAG ACACTAAAAA TGGAAATATT AAGCTTAAAA GTAAAGATAG AGTGCATGTC TTTACTAAGC CCGAATGGCG GGAAGATTAC AAAGCAACTT TGTCGGGCGA AGTGCGGTTT CCGGGGACTT ACCGCTTTAA TCGTGGTGAA ACATTATATG ATGTGATTCA ACGAGCAGGC GGTCTGACTG AATACGCTTA TCCAGAAGGT GCTGTATTTG CGAGAGAAAG CCTGCGTAAA ATAGAAGAAA AACAACTCGC ATTTTTACAT AGGCGCTTAA AAGAAGAAGT CAGTTCGTTA GCATTTCGCC GCCAGTCCAG CAGCAATCCA GTACAAAGTA ATAATACCCA GAGTGCGATG GATACCGTTG AGAAGCTTGG AGTCGCTGAA GCCGTTGGCC GTATGTCCAT TAATCTTAAA AAAATGCTGC AGCACGACGA AGCACAAAAT ATTAATTTAG AGAATCAGGA TTTTTTACAT ATTCCACCAT TACGTAAAGT AATATCAGTC ATTGGACATG TACAGTTTCC AACGGCTCAT ATTTTTGAAG AAAATAAAAG CGTTGATGCC TACTTAGCGC TATCGGGTGG TGCTAAAAAA CAAGCAGATA CAGACCGAGT TTATGTTATC CGTGCAAACG GCAGTGTCTT TATTCCCAAT CAGTCATTCT GGTTTAGCCG TGAAGAACAG CAGTTAATGC CGGGTGATAC TATTGTCATG CCGATGGATA CTGATTACAT GGATAGATTG TCAACCCTTA CCTCATCAAC ACAGATAATG TACCAGTTAG GTGTAGCTTG GAGCGCGATA AGTAATTAG
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Protein sequence | MFNLCLLFSA LMLLVGSFNA LAATPTSAQI QQFKALPSAQ QNALASQYGV NIDAVTAPPA ENSATPDAEP TIEDRTTEDP TTTAQKTPRG LKMFGYDLFA GEPMSLAPLS DLPVPNDYLL GVGDELQIKV FGTKTESYNL VINREGSIHI PDLGPFQARG LTYQQLKTEF TALINRRMIG VETSISLGKL KTMEVFVLGA AYKPGSYVIS SLSSVTQAIK AAGGIERLGS LREIQVKRNN KIIKKIDLYD LLISGDTSSD ISLKQGDVVF IPIKKKTVSI DGFVKRPAIY ELKNEKDIDS ILKLAGGLNA KAYPGVQVTR RTQIGRDLYN FNLEDKQSSQ TFIVENGDQL NVGGVTDLYH NAVSVSGAVS YEGAYQWNAD LTVSDLITSI KFDLNKDADL HNALLVREVG LEHNIKVLYF DLLAAISNPK SDLDLKLQAQ DQLLILNKET GIAEKLGKKS NLSKQIDNQE VNDQFVISDL GDKSKQQSSA QAFRADLLKP VIAQLKAQSN FENAVQIVDI RGAVKFPGVY PLFEHADLKT LINLAGGLKE ASYLTAGELS RIKLIDGKER IHYQTIDIAS AMKDTKNGNI KLKSKDRVHV FTKPEWREDY KATLSGEVRF PGTYRFNRGE TLYDVIQRAG GLTEYAYPEG AVFARESLRK IEEKQLAFLH RRLKEEVSSL AFRRQSSSNP VQSNNTQSAM DTVEKLGVAE AVGRMSINLK KMLQHDEAQN INLENQDFLH IPPLRKVISV IGHVQFPTAH IFEENKSVDA YLALSGGAKK QADTDRVYVI RANGSVFIPN QSFWFSREEQ QLMPGDTIVM PMDTDYMDRL STLTSSTQIM YQLGVAWSAI SN
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