Gene Ping_0752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0752 
Symbol 
ID4623670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp947172 
End bp948206 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content43% 
IMG OID639795956 
ProductApbE family lipoprotein 
Protein accessionYP_942203 
Protein GI119944523 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAT CTGTATCACA ATGGCTGCCC TTAATCGGGC TGGCCTTTTT TATTTCGTCA 
TGTGCTAAAG TTGGCCCGCA GATTGTAGAA GTGCGCGGTA ATACTATGGG CACATATTAT
CAGGTCAAAT ATGTGTTAAG TGCGGAGCAG CAGGGCGACA GCCGATTAGC ACTTAAAGCG
CTACAATCCG ATATTGATAA GCGGCTTGAA TTAGTGAATG ATCAAATGTC GACCTATCGC
CCGGACTCTG AATTATCCCG TTTTAATCGA GCAGAAAAGT CCTTAGAGGT GTCTGCGGCA
ACACGCCAAG TGATTGAAGC GTCCTTAACT TTATTTGAGC AGAGCAACGG GGCATTTGAT
GTGACCGTTG GTCCACTGGT GAATTTGTGG GGCTTTGGCC CAAATAAAAA AGCCAATAAA
GTGCCCTCTG AAGAGTTGAT TGCTGAAAAA CAAAAAATCG TGGGAAGCCA GTATTTGAGT
GTTAACGGCA AGACCATCAG TAAAGCAATT CCTGAGCTGT ATGTCGACTT GTCAGCCATT
GCCAAAGGTT ACGGGGTGGA TGTTATTGCC GATTATCTGC AGGAAGTGGG TATTAATAAT
TACCTGGTTG ATATTGGTGG TGAACTCCGC TTAAAAGGGG AAAAACCTCA GAATACTCCC
TGGATAGTTG CTATTGAGCG ACCGGCTGAG AAGCAAAGTG TTCAGCGGAT AATAAATGTG
GGTGATAATG CGATAGCAAC CTCGGGTAAT TACCGAAATT ATTTTGAGTC TGATGACATA
CATTATTCTC ATTCCATCGA TCCAAGAACC GGCAAACCTA TTAGCCATAA GCTGGTATCG
GTGACCGTGA TTAATAAAAG CAGCATGCTA GCAGATGGTT TAGCGACTGC GATAACAGTA
CTCGGGCCGG AGTCCGGATT AGCCTTTGCA AAAAAATACA ATTTAGCCGT TTATTTGCTG
GTTAAAGAAG GTGATAATAT CAGCGAATAT TACACTTCCG AGTTTATACC TTTTTTTATT
GAGGAGAAAA AATGA
 
Protein sequence
MLKSVSQWLP LIGLAFFISS CAKVGPQIVE VRGNTMGTYY QVKYVLSAEQ QGDSRLALKA 
LQSDIDKRLE LVNDQMSTYR PDSELSRFNR AEKSLEVSAA TRQVIEASLT LFEQSNGAFD
VTVGPLVNLW GFGPNKKANK VPSEELIAEK QKIVGSQYLS VNGKTISKAI PELYVDLSAI
AKGYGVDVIA DYLQEVGINN YLVDIGGELR LKGEKPQNTP WIVAIERPAE KQSVQRIINV
GDNAIATSGN YRNYFESDDI HYSHSIDPRT GKPISHKLVS VTVINKSSML ADGLATAITV
LGPESGLAFA KKYNLAVYLL VKEGDNISEY YTSEFIPFFI EEKK