Gene Ping_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0720 
Symbol 
ID4625067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp914178 
End bp915758 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content43% 
IMG OID639795919 
Productcytochrome bd ubiquinol oxidase, subunit I 
Protein accessionYP_942171 
Protein GI119944491 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACA TAGTTGATTT ATCGCGGTTA CAATTTGCAA TGACCGCCTT GTATCACTTT 
TTATTTGTAC CGCTAACACT CGGCTTGGCG TGGTTATTGC TGATCATGGA ATCGTTATAT
GTAATGACCG GTAAGCAAGT TTACCAAGAT ATGACCAAGT TTTGGGGTAA ACTATTTGGT
ATTAACTTCG CGCTTGGTGT AGCCACGGGT TTAACCATGG AGTTCCAGTT TGGTACTAAC
TGGTCTTATT ATTCGCATTA TGTTGGTGAT GTATTTGGTG CACCCTTAGC TATTGAAGGC
ATGATGGCCT TCTTTTTAGA GTCCACCTTT GTGGGTTTAT TCTTTTTCGG ATGGGAGAGA
CTGAGTAAAT TGCAGCATCT AGGGGCTACT TTTTTGGTGG CATTCGGTTC AAGTATGTCG
GCGTTATGGA TTTTAGTTGC CAATGCCTGG ATGCAGAACC CGGTTGGTGC TGAGTTTAAC
TATACAACCA TGCGCATGGA AATGACCAGT TTTGCTGATT TAGTTTTTAA TCCGGTTGCA
CAAGTCAAAT TTGTGCATAC CGTGGCCTCT GGTTATGTCA CAGGCGCCAT GTTTGTATTG
GCAATCAGCG CATATTATTT GCTGAAAGGG CGTGATCTTG CCTTTGCCAA ACGTTCTTTT
GCCATTGCTG CAGCTTTTGG TACCGCCGGT ATTTTATCAA CTATTGTATT AGGTGATGAA
AGTGGTTATG AGGTAGGTGA TGTGCAGCAA GTCAAACTCG CCGCGATTGA GTCCGAATGG
GAAACCCATC CTGCTCCCGC GGCTTTCACG CTGTTTGGCA TCCCTAATCA GGACGAGCAG
CGTACCGACT ATGCCATTAA AATTCCCTAT GCTTTGGGTA TTATTGCAAC GCGTTCACTC
GATGAGGAAG TCATTGGATT AAAAGAGTTA ATGGTGGAAC ATGAAGCCCG TATTCGCAAC
GGAATGATTG CTTACGCCCA TTTAACGGAT CTGCGCAATG GTGATGAATC GGCTGAAAAA
ATAGCCGCCT TTGAAGCCGT GAAAATAGAT TTAGGTTACG GACTATTGCT GAAAAGATAT
GCGCCAAATG TTGTTGATGC TACTGAAGAA CAAATTCAGA TGGCTGTTGA TAACAGTATT
CCCGGGGTCG CGCCGATTTT TTGGGCCTTT AGAATCATGG TCGGCTGTGG TTTGTTGATG
TTATTTATCT TCTTATTTGC ATTTTATCAA TCAGCTCGTA GCCGGATAGG CAAAAATAAA
ACTTTCCTTA AAATTGTACT TTATAGTCTG CCGTTACCTT GGATAGCAAT AGAGGCAGGA
TGGATTGTTG CCGAGTATGG TCGTCAGCCC TGGGCGATTG CAGAAATATT GCCAACCCAT
ATGAGTGTCT CAAGTATTTC AAGTGAACAA CTGCTCTTTA GCATTATTTC AATTGCCGCA
TTCTATACCG TATTAATAGC GGTTGAGATG TACTTAATGT TCCACTTTGC CCGGTTAGGG
CCAAGTACCC TTAAAACAGG AAAATATCAT TTCGAGCAGT TAGCTGATCA CACACAAACA
CAAAACAATA AACAGGGATA G
 
Protein sequence
MDDIVDLSRL QFAMTALYHF LFVPLTLGLA WLLLIMESLY VMTGKQVYQD MTKFWGKLFG 
INFALGVATG LTMEFQFGTN WSYYSHYVGD VFGAPLAIEG MMAFFLESTF VGLFFFGWER
LSKLQHLGAT FLVAFGSSMS ALWILVANAW MQNPVGAEFN YTTMRMEMTS FADLVFNPVA
QVKFVHTVAS GYVTGAMFVL AISAYYLLKG RDLAFAKRSF AIAAAFGTAG ILSTIVLGDE
SGYEVGDVQQ VKLAAIESEW ETHPAPAAFT LFGIPNQDEQ RTDYAIKIPY ALGIIATRSL
DEEVIGLKEL MVEHEARIRN GMIAYAHLTD LRNGDESAEK IAAFEAVKID LGYGLLLKRY
APNVVDATEE QIQMAVDNSI PGVAPIFWAF RIMVGCGLLM LFIFLFAFYQ SARSRIGKNK
TFLKIVLYSL PLPWIAIEAG WIVAEYGRQP WAIAEILPTH MSVSSISSEQ LLFSIISIAA
FYTVLIAVEM YLMFHFARLG PSTLKTGKYH FEQLADHTQT QNNKQG