Gene Ping_0714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0714 
Symbol 
ID4625061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp906590 
End bp908374 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content39% 
IMG OID639795913 
ProductC4-dicarboxylate transport sensor protein ATPase subunit 
Protein accessionYP_942165 
Protein GI119944485 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCATA GTCATACCCA ACGAATAACA CTTGTACTTA TTTTTTTCTA TTTTCTAACC 
CTTATTCTGT CTGTTAATTG GTTATGGAAA TTTAGTTATG AACGTCTTAT CACGACCAAT
CAGGAACAAC TTGAGCGCTT TAGCCGTCAC CTTGAAAGTC AACTCGAACG CTTTGTTTAT
ATTCCACAAC TGTTATCTCG ACAAGGGATA TTGATTGACA CATTAAATTC AGTCAATAAC
CCAGCTCAAC GTGATATCAC TAACCGCCAC CTAGCGTCTA TTAATGAAAT TATTGGCGCA
TCGGACACTT ACCTTCTCGA TGCTAAGGGA ACAACTATTG CGGCCAGTAA TTGGTCAACG
AGCACCTCTT TTGTTGGCAA AAATTTCGCT TTCCGCCCCT ACTTTCAACA GGCGATAAAT
AATCAGCGGG GACATTATTT TGCGCTGGGT TCCACTTCTG GTCAGCGCGG TTATTATTTT
TCCTATCCCG TTAAATATGC CGCAGGAGTG TTAGGTGTGG TGGTCATTAA AATGGATCTT
TCTTCAATAG AAAAAAATTG GTCGGGAAAA GATCAGCATT TTCTGGTTAC TGATAAAAAT
CATATTGTCT TTATTTCCAG CGAAAAATCT TGGTTATTCC ACAGTATGGC CCCGCTTTCA
ACTCAATTAA AAAATCAGAT TTTAAATAGT CGCCGATACC TTTCTCGAGA AATCAAAACA
TTATCCTTTT CAGGTGAGTT AGATAAGAGC CCTGCGGCGC TCAGTTTAAA TACTAATAAA
CGATTAGGGA AAAATTATTT ATCACTCACC AAAACGTTAA ACAATGCGGA TTGGCAGGTG
CGGGTGCTTG TCCCGACAAC ATCCTTATTA ATTAATGTCA GCATACTTAT TGTGTTTCTT
TCCTTGTTTT ATTTATCCGT CTATCTTATT TACATTTTGA TAAGTCAAAA ACAAAATAGA
CGCCATGAAC AAACGCGATT ACAAGATAAC GCTAAGCAAC AACTTGAATT TCAGGTGATG
CGCCGCACCT CTGCATTACA TGCGGAAATA GATGAAAGAC GCAAAGCTGA ACGGGCGCTG
CGGGAGACTC AAAAAGAGTT GATCCAGTCT GCCAAATTAG CCGTGTTAGG GCAACTTTCA
GCCAGCATTA GTCATGAGTT GAATAACCCT CTGGCGGCCA TTCGCAGTTA TGCTGAAAAT
GCCATTATAT TTCTTGAGCG TGATAAAATA GATAAAGTTT CCAATAACTT AATACGCATT
ACCTACCTTA CCGACCGGAT GGCAAAAATT AGTTCTCAGC TCAAAGCTTT TGCACGAAAA
TCAAACGGCG AGCTTTCTAT TATCTCTTTA CAGCCGGTGT TAATGGCATC CTACGAATTG
GTTAAACCCC AACTTAAGGC AAGCCGAGTA TTATTACATA TGAACCTGCC CGATAAACCG
GTTCAGGTAA AAGCTGAGCC TATTCAGTTA GAGCAAATAG TGGTTAATTT ACTTTCCAAT
GCCATTCAGG CAATGGAAGA ATGTAAAGAA AAACAGATTG AAATAATATT ATCAGTGAAT
GGTCAACAGG CACAGATTGA AGTGATAGAC ACCGGTATAG GTATTAATGA AAGTGATTTA
GCAAAATTAT TCGAACCTTT CTTTACCACT AAAGAAATGG GGCTTGGTTT AGGTCTGTCA
ATTTCCCAGC AGATCATAAA AAATATGCAC GGTAAAATTT GGGCGAAAAA CAGACAAGAT
CAGGGTGCCA AATTTTGTGT TAGCCTGCCA TTACAGAATG AATGA
 
Protein sequence
MSHSHTQRIT LVLIFFYFLT LILSVNWLWK FSYERLITTN QEQLERFSRH LESQLERFVY 
IPQLLSRQGI LIDTLNSVNN PAQRDITNRH LASINEIIGA SDTYLLDAKG TTIAASNWST
STSFVGKNFA FRPYFQQAIN NQRGHYFALG STSGQRGYYF SYPVKYAAGV LGVVVIKMDL
SSIEKNWSGK DQHFLVTDKN HIVFISSEKS WLFHSMAPLS TQLKNQILNS RRYLSREIKT
LSFSGELDKS PAALSLNTNK RLGKNYLSLT KTLNNADWQV RVLVPTTSLL INVSILIVFL
SLFYLSVYLI YILISQKQNR RHEQTRLQDN AKQQLEFQVM RRTSALHAEI DERRKAERAL
RETQKELIQS AKLAVLGQLS ASISHELNNP LAAIRSYAEN AIIFLERDKI DKVSNNLIRI
TYLTDRMAKI SSQLKAFARK SNGELSIISL QPVLMASYEL VKPQLKASRV LLHMNLPDKP
VQVKAEPIQL EQIVVNLLSN AIQAMEECKE KQIEIILSVN GQQAQIEVID TGIGINESDL
AKLFEPFFTT KEMGLGLGLS ISQQIIKNMH GKIWAKNRQD QGAKFCVSLP LQNE