Gene Ping_0699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0699 
Symbol 
ID4627030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp889337 
End bp891115 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content44% 
IMG OID639795898 
Productaspartyl-tRNA synthetase 
Protein accessionYP_942150 
Protein GI119944470 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0173] Aspartyl-tRNA synthetase 
TIGRFAM ID[TIGR00459] aspartyl-tRNA synthetase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACTA TGTATTGTGG CGAAGTGACT GAAGCCGTCT TAGGTCAGGA AATTCAGTTA 
GTAGGTTGGA TCAATAAACA GCGCGATTTA GGCGGTGTAA TCTTTTTAGA TATGCGCGAC
CGTGCCGGTA TTGTACAAGT GTTTTTTGAT GCAGATACAC CCATAGCAAC GGCACTTGCG
ACTACGGTAC GTAATGAATT CTGTATCCAA ATTAAAGGCT TAGTTCGCGC GCGTCCCGAA
GGTCAAGTCA ACAAAGATAT GACCACCGGT GGGATTGAGA TTCTAGGCCT TGAACTCGAA
ATATTAAACC GCTCAGAGCC ATTACCGCTT GATAGCAACC AGCAGAACAG TGAAGAGCAG
CGTTTACGTT ACCGTTATCT GGATTTACGT CGCCCGGAAA TGGCCAAACG GATGCAGTTC
CGCGCTAAAG TAAGCAGTTT TGTGCGTCGT TTCCTCGATG ATCAGGATTT TTTAGACGTT
GAAACGCCTA TTTTGACCAA AGCGACACCG GAAGGCGCGC GTGATTATTT AGTGCCAAGC
CGAACCCATA AAGGGAAATT CTTTGCCTTG CCGCAATCTC CACAGCTGTT TAAACAATTA
TTAATGATGT CCGGTATGGA TCGTTATTAC CAAATTGTTA AATGTTTCCG AGATGAAGAT
TTACGTGCCG ACCGCCAGCC TGAATTTACC CAAATAGATA TTGAAACCTC CTTTATGAAT
GCGGATCAGG TGATGGAGAT CAGCGAAGAG ATGATAGTGA AGCTTTTCAA AGAGATGCTC
AATGTTGATT TAGGCAACTT TCCTAAAATG ACTTATGCCG AAGCACTGCG CCGTTTTGGC
AGTGATAAAC CTGATCTGCG TATTGATTTT GAACTGTATG ATGTTGCTGA TTTAATGAAA
GACGTTGAAT TTAACGTTTT CTCCGGTCCT GCAAATGATC CGGACAGCCG TGTTGCCGTT
ATCTGTGTAC CGGGTGGCGC AAAACTTTCG CGTAAAAATA TTGATGAATA TGGAAAATTT
GTGACTATCT ACGGTGCTAA AGGACTTGCA TGGATGAAAG TCAATGAAGT GGCTAAAGGT
TTAGAAGGTG TACAATCACC GGTTGCTAAA TTCTTAAATG AAGAAATTGT CACAGAGTTA
CTCATCCGTA CGGGTGCAAA AGATGGTGAT ATCATCTTAT TTGGCGCTGA CAAATCAAAT
ATTGTCAGCG AAGCTATCGG CGCATTACGT CTTAAAGTCG CGCAAGACTT AGGGTTGGTT
AAAGATCAAT GGAAACCGCT TTGGGTTATC GATTTCCCGA TGTTTGAACC GCTGGATGAT
GGCGGATTAA CACCGCTGCA CCATCCTTTT ACCGCGCCCA TTGGTTTAAC AGTTGAAGAA
TTGGAAGCAA ATCCTGTTGG CGCTATCTCC AATGCCTACG ATATGGTCTT AAACGGTTGT
GAACTCGGTG GTGGTAGTGT GCGTATCCAT AAACAAGATA TGCAGGCGGC TATTTTCCGC
ATTCTAAAGA TCAGCGATGA AGAAGCTGAA GATAAATTTG GTTTCTTATT AGAAGCCCTT
AAATACGGTG CTCCACCGCA TGCAGGTTTA GCCTTTGGTT TAGACCGTTT AGTGATGTTA
ATGACCGGCA CAAGCTCAAT TCGTGACGTC ATTGCTTTCC CGAAAACGGC TTCTGCTGCC
TGTCCTTTAA CCAATGCACC AAGTTTTGCT AACCCGGCGG TGCTGGCTGA GTTAAACGTT
GCTGTTGTTG CCGATCCGAA GAAAGTTATT AGTGAATAA
 
Protein sequence
MRTMYCGEVT EAVLGQEIQL VGWINKQRDL GGVIFLDMRD RAGIVQVFFD ADTPIATALA 
TTVRNEFCIQ IKGLVRARPE GQVNKDMTTG GIEILGLELE ILNRSEPLPL DSNQQNSEEQ
RLRYRYLDLR RPEMAKRMQF RAKVSSFVRR FLDDQDFLDV ETPILTKATP EGARDYLVPS
RTHKGKFFAL PQSPQLFKQL LMMSGMDRYY QIVKCFRDED LRADRQPEFT QIDIETSFMN
ADQVMEISEE MIVKLFKEML NVDLGNFPKM TYAEALRRFG SDKPDLRIDF ELYDVADLMK
DVEFNVFSGP ANDPDSRVAV ICVPGGAKLS RKNIDEYGKF VTIYGAKGLA WMKVNEVAKG
LEGVQSPVAK FLNEEIVTEL LIRTGAKDGD IILFGADKSN IVSEAIGALR LKVAQDLGLV
KDQWKPLWVI DFPMFEPLDD GGLTPLHHPF TAPIGLTVEE LEANPVGAIS NAYDMVLNGC
ELGGGSVRIH KQDMQAAIFR ILKISDEEAE DKFGFLLEAL KYGAPPHAGL AFGLDRLVML
MTGTSSIRDV IAFPKTASAA CPLTNAPSFA NPAVLAELNV AVVADPKKVI SE