Gene Ping_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0629 
Symbol 
ID4624735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp810290 
End bp811096 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content40% 
IMG OID639795829 
Productglutamate racemase 
Protein accessionYP_942081 
Protein GI119944401 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAA AACAGGTGCT TATATTTGAC TCCGGTGTAG GGGGGTTATC TGTCTTTGAT 
CAAGTGAGAA AACAGTCACC GGGGATAAAA TGCTTTTATC TATTTGATAA TGCATATTTC
CCCTATGGTG AATTACAGGC TGATTTTCTT ATTCAGCGTT TAATGAGTTT ACTGAGTTCA
TTTTTGGGCA GGCACAAAAT TGATTTGATT GTGATTGCCT GTAATTCAGC CAGCACAGTT
GCATTACAGT ATTTGCGTGA ATCTTTCTCT ATTCCCATTG TAGGTGTGGT ACCGGCAATT
AAACCCGCAA CATTTTTAAC AAAAAATGGG GTGATTGGTT TATTAGCCAC TCCCGCGACT
ATTAATGGTG CTTATACCGC TCGACTAATT GATGAATTTG CAGCCGATAA GCAAGTATTG
AAAATTGGTT CAACGCAATT GGTTAAACTG GCAGAGTTAA AGCTGCAGGG GAAATTAATA
CAGCAGGCAG ATATCGAAGG GGTATTAGCA GCCTGGTTAA TGTTAGACAC AATGCCCGAT
ACCATAGTCT TAGGTTGTAC TCATTTTCCT TTATTAAAAG CGGAAATTTT CCGCTGCTTC
AAAGATAAAA TTAACTTAGT GGACTCGGGT AATGCGATTG CGCAGCGGGT AACCCAACTG
CTTGGGGAAA GTGAGATGAC AGCAAAAGAA AATACCCATC AAGCTTATTT TACCAAGGTT
TATCAGCTTG ATGAATCCAC TAATTTCAGC GCCTTGCAGC GCAGTTTTTT AGCTTACGGT
TTTAACTCAT TACAGCTGTA TATTTAA
 
Protein sequence
MSVKQVLIFD SGVGGLSVFD QVRKQSPGIK CFYLFDNAYF PYGELQADFL IQRLMSLLSS 
FLGRHKIDLI VIACNSASTV ALQYLRESFS IPIVGVVPAI KPATFLTKNG VIGLLATPAT
INGAYTARLI DEFAADKQVL KIGSTQLVKL AELKLQGKLI QQADIEGVLA AWLMLDTMPD
TIVLGCTHFP LLKAEIFRCF KDKINLVDSG NAIAQRVTQL LGESEMTAKE NTHQAYFTKV
YQLDESTNFS ALQRSFLAYG FNSLQLYI