| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0615 |
|---|
| Symbol | |
|---|
| ID | 4624352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 796626 |
|---|
| End bp | 797696 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639795815 |
|---|
| Product | glycine betaine ABC transporter, binding protein inner membrane component |
|---|
| Protein accession | YP_942067 |
|---|
| Protein GI | 119944387 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00230108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACAG AAACAACAAC TCAAGCCGCT GACCCTTGGG CCAGTGCAGC AGCGCCGGCC
GATCCATGGA CGACGGCCTC CTCCGCAACA TCAACCGCGA ATGATTGGTT GAACGTTGCC
ACCGAAGCCG AGCCTTTTGA TTGGTTGCAT CCCTTCCAGG AGGCTATTAT GCCTTTTGAT
CAGTGGGTTG AGACCGGGCT TAACTGGTTA GTGGTTCACG GGCGTCCGGT ATTTCAGGCA
ATCCGTGTCC CGATTGATTT GATTCTCACT TCATTTCAAA GTGCATTGGT ATCAACGCCC
GCTCCGATTA TGTTACTTAT TTTAGCCTTG ATTGCCTGGC AACTAGCCGG ACCCCGAATG
GGAATTACCT CTTTATTCTC TTTGATTATC ATTGGACTGG TCGGCGCGTG GTCACAAGCG
ATGGTGACAC TCGCACTGGT GATGACCTCA GTATTTTTCT GTTTTTTGAT GGGCTTACCC
TTAGGGATCT GGTTGGCTCG AAGTCAATCA GCCGCGAAAA TAATTCGACC TATGCTTGAT
GCGATGCAAA CCACACCCGC TTTTGTCTAT TTAGTGCCTA TTGTTATGCT CTTTGGTATC
GGTAATGTTC CGGGTGTTGT GGTGACTATT ATTTTCGCCT TACCACCCAT TGTCCGTCTG
ACTATTCTAG GTATTCAGCA AGTACCGGAA GAGCTGATCG AAGCAGGGCA CGCTTTTGGT
GCCAGCCCGA AACAGATGCT TTATCGGATT CAACTCCCCT TAGCAATGCC CACTATTATG
GCCGGAGTGA ACCAAACTCT CATGTTGTCG CTGTCCATGG TGGTGATAGC CTCTATGATT
GCCGTCGGTG GTCTGGGACA AATGGTGTTA CGCGGGATTG GACGACTGGA TATGGGTCTG
GCGGCTGTCG GTGGTCTTGG GATTGTTATT CTTGCTATCT TGCTTGATCG TATTACGCAA
ACCATAGGTA AAAACAAACG CGATCAAAAA ACGCGCTGGT ATCAAACAGG CCCCGTTTCA
TTGATTTATT TACTGTTAAA AAAACTTAAC CACAATAAAA CTGTAAACTA G
|
|---|
| Protein sequence | MATETTTQAA DPWASAAAPA DPWTTASSAT STANDWLNVA TEAEPFDWLH PFQEAIMPFD
QWVETGLNWL VVHGRPVFQA IRVPIDLILT SFQSALVSTP APIMLLILAL IAWQLAGPRM
GITSLFSLII IGLVGAWSQA MVTLALVMTS VFFCFLMGLP LGIWLARSQS AAKIIRPMLD
AMQTTPAFVY LVPIVMLFGI GNVPGVVVTI IFALPPIVRL TILGIQQVPE ELIEAGHAFG
ASPKQMLYRI QLPLAMPTIM AGVNQTLMLS LSMVVIASMI AVGGLGQMVL RGIGRLDMGL
AAVGGLGIVI LAILLDRITQ TIGKNKRDQK TRWYQTGPVS LIYLLLKKLN HNKTVN
|
|---|
| |