Gene Ping_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0601 
Symbol 
ID4624247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp783748 
End bp784404 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content41% 
IMG OID639795802 
Productribose 5-phosphate isomerase 
Protein accessionYP_942054 
Protein GI119944374 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAG ATGAAATGAA AAAAGCAGCC GCCTATGCAG CCTTGGAATA TGTACAGCCA 
GATTCAATTG TTGGCGTCGG CACTGGCTCA ACAGTGACTC ATTTTATTGA TGCGCTGGCA
ACCATAAAGG ATCTTATCAA AGGTGCGGTT TCAAGCTCCG ATGAGTCAAC TGCAAGGTTA
CAATCCTATG GTATCGATGT TTTTGATCTT AATGAGGTTT CTGAATTGAG CATTTATGTC
GATGGTGCGG ATGAAATAAA TCCCTATAAC CACATGATCA AAGGTGGCGG TGCAGCCTTA
ACGCGTGAAA AGATAATTTC AGCGGTTGCT GAAAAATTTA TCTGTATTGT GGATAACACT
AAAAATGTTG ATATTCTGGG TGACTTTCCA TTACCTATTG AAGTGATTCC GATGGCGCGC
AGTTATGTCG CACGTGAATT GGTTAAATTA GGTGGAGATC CTGTTTATCG TCAGGGTGTG
GTAACAGACA ATGGCAATGT GATTTTAGAT GTTCATAACT TAAAAATTGC TGAACCCCTT
AAATTAGAGG CGCAAATCAA TGCGATTGTT GGCGTAGTCA CCAATGGTTT ATTTGCAAAC
CGTGCGGCTG ATGTTGTTTT AGTTGGTACA CCAGAAGGTG TTAAAACGCT AAAATAA
 
Protein sequence
MTQDEMKKAA AYAALEYVQP DSIVGVGTGS TVTHFIDALA TIKDLIKGAV SSSDESTARL 
QSYGIDVFDL NEVSELSIYV DGADEINPYN HMIKGGGAAL TREKIISAVA EKFICIVDNT
KNVDILGDFP LPIEVIPMAR SYVARELVKL GGDPVYRQGV VTDNGNVILD VHNLKIAEPL
KLEAQINAIV GVVTNGLFAN RAADVVLVGT PEGVKTLK