Gene Ping_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0583 
Symbol 
ID4624138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp762370 
End bp763296 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content44% 
IMG OID639795784 
Productglutamate--tRNA ligase 
Protein accessionYP_942036 
Protein GI119944356 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTATAA GCTATCTGTT TATAAGTTAT TTTTTGCCTA AGCCCGTCAT ATATCGTGGA 
CGCTTTGCTC CCTCGCCTTC AGGTCCAATG CACTTTGGCT CTTTGGTCGC AGCATTAGGC
AGTTATCTGC AGGCAAGATC TCAGCACGGA TCATGGCAAG TTCGTATTGA TGATATTGAT
CCTCCCCGTG AAGTAAAAGG TGCCGCACAG GATATTCTCC TGACCCTGCA GGCTTACGGA
CTAAACTGGG ATGGCGAAGT CATTTACCAA AGTCATAACA GCCAATCCTA TGAAAATGTC
CTAAGCCAAC TGACAGAGCG ACAACTCTGT TATGCATGCG CCTGCAGCCG TAAGATAATT
CGCCAAAGTG GGGGACTTTA TCAGGGCACC TGCCGGAATA AACAGCTCCC GGAAATAAAC
CATGCACTGC GCATTAATTT ATACAATATG ACCCATCCTG TGACGTATTT TGATGATCAA
TTGCAGGGAA GTGTGGTATT AGATAAAAAA CAAGCGACTG AAGATTTTAT TATCAGGCGT
AAAGAGGGCT TATATGCTTA TAATCTGGCC ACCGTCATAG ATGATATCAA TCAAGGTATT
ACAGAGATAG TACGCGGTGC TGATCTGCTC AACACCACGG GTAAACAACT TACCTTATAT
CAGCTGCTAA ATAAGAAACC ACCCGGTTAT TTACACTTGC CCGTCGCGGT GACAGCACCC
GGCAACAAAC TTTCCAAACA AAACCATGCG TTAGCAATCA GTAAAGACAA TCCAAGACCA
ACATTATTAG CAGCACTCCG CTTTCTAGGG CACACTGTGC CCCAGGAAAT GGCGCTAAAT
AGTTGCTTCG AAATACTGAA ATGGGCAATA CAAAACTGGT CGCTGGACAA GCTCCCCCAG
CTTGCTGAAA TTCAAATAAA AAATTAA
 
Protein sequence
MFISYLFISY FLPKPVIYRG RFAPSPSGPM HFGSLVAALG SYLQARSQHG SWQVRIDDID 
PPREVKGAAQ DILLTLQAYG LNWDGEVIYQ SHNSQSYENV LSQLTERQLC YACACSRKII
RQSGGLYQGT CRNKQLPEIN HALRINLYNM THPVTYFDDQ LQGSVVLDKK QATEDFIIRR
KEGLYAYNLA TVIDDINQGI TEIVRGADLL NTTGKQLTLY QLLNKKPPGY LHLPVAVTAP
GNKLSKQNHA LAISKDNPRP TLLAALRFLG HTVPQEMALN SCFEILKWAI QNWSLDKLPQ
LAEIQIKN