Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0567 |
Symbol | |
ID | 4623944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 736503 |
End bp | 737171 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639795763 |
Product | pseudouridine synthase |
Protein accession | YP_942020 |
Protein GI | 119944340 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAAATT TTGTTTACTA TCCCCCCACA ACCCCCTATT TAGATATCCT TTATCAGGAT GACGATATTG TTGTCTTAAA TAAACCCTAT GGTTTATTAA GTGTCCCTGG CCGAGCAAAA AAAAATCGTG ACAGTTTGGC CTTACGTATT TTACGTGTCT GGCCAAATGC ATCCGTTGTA CACCGTTTAG ATATGGCCAC CTCTGGACTG CTTATTTTAA CCATGCGTAA ATCTGCACAA AGTCATATAG GACGACAATT CCAACAAAAA ATAATAGATA AAACCTATTA CGCACGCGTT GAAGGCATTA TCAAAGAGGA TAATGGAGTC ATTGATTTAC CCATTCGTTG TGACTGGGAA AACCGCCCGC GTCAAATTGT TGATTTTGCC GAGGGTAAAA GCTCGCAAAC AGAGTGGTCA GTGGTTAAAA GAGAAAAGTT AACCACTTTA GTTTGTTTAA AGCCTTTAAC GGGGCGGACT CATCAGTTAC GCGTACATCT GCAGGCGATT GGGCACGCGA TTGTTGGCGA TGAATTTTAC TCAACCGAAT TTGGTAAGAA ATTATCACCG CAGCGCCTGG CATTACACGC CGCAAGCATC ACCCTTACCC ATCCTTCAAC TCAGCAACGT ATTACCTTTA ATTGCCCTCC ACCCTTTATG AATATTTAA
|
Protein sequence | MPNFVYYPPT TPYLDILYQD DDIVVLNKPY GLLSVPGRAK KNRDSLALRI LRVWPNASVV HRLDMATSGL LILTMRKSAQ SHIGRQFQQK IIDKTYYARV EGIIKEDNGV IDLPIRCDWE NRPRQIVDFA EGKSSQTEWS VVKREKLTTL VCLKPLTGRT HQLRVHLQAI GHAIVGDEFY STEFGKKLSP QRLALHAASI TLTHPSTQQR ITFNCPPPFM NI
|
| |