Gene Ping_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0567 
Symbol 
ID4623944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp736503 
End bp737171 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content42% 
IMG OID639795763 
Productpseudouridine synthase 
Protein accessionYP_942020 
Protein GI119944340 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAATT TTGTTTACTA TCCCCCCACA ACCCCCTATT TAGATATCCT TTATCAGGAT 
GACGATATTG TTGTCTTAAA TAAACCCTAT GGTTTATTAA GTGTCCCTGG CCGAGCAAAA
AAAAATCGTG ACAGTTTGGC CTTACGTATT TTACGTGTCT GGCCAAATGC ATCCGTTGTA
CACCGTTTAG ATATGGCCAC CTCTGGACTG CTTATTTTAA CCATGCGTAA ATCTGCACAA
AGTCATATAG GACGACAATT CCAACAAAAA ATAATAGATA AAACCTATTA CGCACGCGTT
GAAGGCATTA TCAAAGAGGA TAATGGAGTC ATTGATTTAC CCATTCGTTG TGACTGGGAA
AACCGCCCGC GTCAAATTGT TGATTTTGCC GAGGGTAAAA GCTCGCAAAC AGAGTGGTCA
GTGGTTAAAA GAGAAAAGTT AACCACTTTA GTTTGTTTAA AGCCTTTAAC GGGGCGGACT
CATCAGTTAC GCGTACATCT GCAGGCGATT GGGCACGCGA TTGTTGGCGA TGAATTTTAC
TCAACCGAAT TTGGTAAGAA ATTATCACCG CAGCGCCTGG CATTACACGC CGCAAGCATC
ACCCTTACCC ATCCTTCAAC TCAGCAACGT ATTACCTTTA ATTGCCCTCC ACCCTTTATG
AATATTTAA
 
Protein sequence
MPNFVYYPPT TPYLDILYQD DDIVVLNKPY GLLSVPGRAK KNRDSLALRI LRVWPNASVV 
HRLDMATSGL LILTMRKSAQ SHIGRQFQQK IIDKTYYARV EGIIKEDNGV IDLPIRCDWE
NRPRQIVDFA EGKSSQTEWS VVKREKLTTL VCLKPLTGRT HQLRVHLQAI GHAIVGDEFY
STEFGKKLSP QRLALHAASI TLTHPSTQQR ITFNCPPPFM NI