Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0562 |
Symbol | |
ID | 4623939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 729220 |
End bp | 730776 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639795758 |
Product | oligopeptide ABC transporter extracellular solute-binding family 5 protein |
Protein accession | YP_942015 |
Protein GI | 119944335 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTT TCAAAACCAA ACTAACGGTT GCTTTGCTGG CAGCAGGATT AAGCTTTAGT GTTGCAGCAG CAGATATTAC TGTTGCTTAT GATGCTGATC CGGTATCACT TGACCCGCAT GAGCAACTTT CAGGTGGAAC GCTGCAGATG TCCCATATGC TTTTTGATCC GCTTATTCGT TTCACTCAAG AAATGGACTT TGAACCCCGT TTAGCTTCAA AATGGGAACG TATTGATGCG ACCACATTCC GCTTTAATCT GCGTAAAGGG GTTAAATTCC ACTCCGGCAA TACGATGACT GCGGACGATG TTATTTGGAC ATTTAATCGT CTGAAAAACT CTGCTGACTT TAAAGGCGTT TTTTCACCTT ATGAGAAAAT GATTAAAATC GATGATTACA CGGTAGAGAT CAAGTCAACT GAACCTTACC CGTTAGTACT GCAAACGGCG ACCTATATCT TCCCGATGGA CAGAAAATTC TATACTGGCG AAATGGACGG TAAAGATAAA AGTGAAATTT TAAAACATGG TGGTTCTTTT GCGTCAACGC ACGTTTCAGG CACAGGTCCC TATACAATAA CAACACGTGA ACAGGGCATT AAAGTGGTAT TTGATCGTTT TGATGATTAT TGGGATACAA ACTCTCCCGG TAACGTTGAT AAACTGACAC TGGTACCGAT TAAAGAAGAT GCAACACGTG TTGCAGCCCT TCTTTCTGGT GATGTCGATA TGATCTATCC GGTGGCACCA AACGATCAGA AACGTGTTGC TGATACTGAA GGTCTTAAAC TAACGACTGT TCCCGGCTCT CGCATTATCA CTTTCCAAAT GAATCAGAAA AGTAATCCGG CGCTTAAAGA TGTACGCGTT CGCCAGGCGA TTGTCCATGC CATTAATAAT GACGGTATTG TTAAAAAGAT CATGAAAGAT TTTGCAACGA CTGCTGGCCA ACAAGGACCT GCTGGTTACG CGGGTTATGA TGAAGCCTTA GTGCCTCGTT TTGATGTGGC AAAAGCGAAG AAATTAATGG AAGAAGCGGG TTACTCTAAA GATAAACCCT TGCAGATTTC TATGATGGCA CCCAACAACC GTTATGTGAA GGATGCTCAA ATCGCACAGG CAACTGCCGG TATGCTAGCT AAAATTTACA TTAATGTAGA CTTGAAAACA CTGCCTAAAG CGCAATACTG GCCTGAATTT GATGTTTGTG CTTCGGACAT GATGATGATC GGTTGGCATT CAGATACAGA AGATTCAGCT AACTTTTCTG AATTCCTGAT GATGACGCGT GATGCTGATG CGGGTAAAGG TGCTTATAAC TGCGGGAATT ACTCTAATCC AGAAGTTGAT CGTTTAGTTA ATGCTGCCAA TGCTGAAACA GATCCTGCTA AACGTGCGAC TATGTTACAA AAGGTTGAGC AAATATTGTA CAAAGATGCG GCATTTGTAC CTCTTCATTG GCAGAACTTG GCATGGGGAT CAAAATCTAA CCTTCAGATT GAACCCATAG TTAACTCCAT GAACTTCCCA TACTTCGGTG ACCTTATTGT TAAATAG
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Protein sequence | MKFFKTKLTV ALLAAGLSFS VAAADITVAY DADPVSLDPH EQLSGGTLQM SHMLFDPLIR FTQEMDFEPR LASKWERIDA TTFRFNLRKG VKFHSGNTMT ADDVIWTFNR LKNSADFKGV FSPYEKMIKI DDYTVEIKST EPYPLVLQTA TYIFPMDRKF YTGEMDGKDK SEILKHGGSF ASTHVSGTGP YTITTREQGI KVVFDRFDDY WDTNSPGNVD KLTLVPIKED ATRVAALLSG DVDMIYPVAP NDQKRVADTE GLKLTTVPGS RIITFQMNQK SNPALKDVRV RQAIVHAINN DGIVKKIMKD FATTAGQQGP AGYAGYDEAL VPRFDVAKAK KLMEEAGYSK DKPLQISMMA PNNRYVKDAQ IAQATAGMLA KIYINVDLKT LPKAQYWPEF DVCASDMMMI GWHSDTEDSA NFSEFLMMTR DADAGKGAYN CGNYSNPEVD RLVNAANAET DPAKRATMLQ KVEQILYKDA AFVPLHWQNL AWGSKSNLQI EPIVNSMNFP YFGDLIVK
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