Gene Ping_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0537 
Symbol 
ID4623724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp686245 
End bp687927 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content44% 
IMG OID639795733 
Productmalate dehydrogenase 
Protein accessionYP_941990 
Protein GI119944310 
COG category[C] Energy production and conversion 
COG ID[COG0281] Malic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTTC AACGACCTTT ATATATCCCC TTTGCCGGTC CGGCATTATT AGAAAGCCCT 
TTACTTAATA AAGGCAGCGC TTTTTCCCAG GAAGAAAGGA ACAACTTCAA CTTAACCGGC
CTGCTGCCAC ATAATATCGA AACCATTGAA TCGCAATCGA CGAGAGCCTA TCAACAGCTT
AGTTCATTTA AATCTGATTT AGATAAACAT ATCTACCTGC GAAATATCCA GGATACTAAT
GAGACCTTAT TTCATCATCT GATAGAAAAT CATCTCGAAG AAGTTATGCC GCTTATTTAT
ACACCAACGG TCGGGCTTGC TTGTGAGCAA TTTTCTAAAA TATACCGGCG TAAAAGAGGA
TTGTTTGTTT CCTACCCTGA GCGTCATAAA ATTGATGATA TGTTACAAAA TGCCACCAAA
CAAAACGTAA AAGTCATTGT AGTGACCGAT GGTGAGCGCA TATTGGGGTT AGGCGATCAG
GGCATAGGCG GCATGGGCAT TCCAATAGGT AAACTCGCTT TATATACTGC CTGCGGAGGT
ATCAGTCCCG CTTATTGTTT GCCAATCGTA CTGGATGTTG GTACAAATAA CAGTCAGTTA
CTGGCAGATC CTATGTATAT GGGCTGGCGT AATCCCCGTA TTACGGGCGA AGAATATAAT
GAATTTGTAG ATCTCTTTAT TCAGGCGGTC AAACGCCGCT GGCCTGAGGT ACTACTGCAG
TTTGAAGATT TTGCACAGAC TAATGCAACT CCTCTATTAA ATAAATACCG CGATCAGATA
TGCTGCTTTA ATGACGATAT TCAAGGTACT GCAGCCGTTT CCGTCGGTAC ACTTATTGCG
GCTTGCCAGA ATAAAGGTGA AAAACTCAGT GATCAGCGTA TTGCTTTCCT GGGGTCGGGA
TCTGCGGGTT GCGGTATTGC CCAGCACATC GTAAGACAAA TGCAGCGTGA AGGTTTGACC
CAAGAGCAGG CACGCCAGCG AGTATTCATG GTTGACCGTT ATGGCCTGTT AACTGATCAA
ATGACCAACC TGCAGGCGTT TCAACAGCCT CTGATACAAT ATACAAAGGA TCTTAGTCAC
TGGGATATAA GCTCCCATAT TGGACTAGAG CAGGTCATCA AACAGGGCAA TATCAGCGTA
TTATTTGGTG TAAGTGGTCA ACCTGGCCTA TTTACTCAAG AGGTTGTTGA AAGTTTGTGT
GCTAACGTTG ATCATCCGAT TGTATTGCCT TTATCAAATC CCACCTCAAG GGTTGAAGCC
ACTCCAAAGG ATATAACCAC CTGGAGTCAT GGTCAGGCGA TTGTTGCAAC CGGCAGTCCA
TTTCCGCCCA CTTTATATGA AAATGAGTAT ATTGAAGTAT CCCAGTGTAA CAATAGTTAC
ATATTCCCAG GGATCGGGCT GGGGGTCTTA GCGGCGCGGG CGACGGCAAT TAGCGATAAT
ATGTTAATGG CCGCCAGTCA GGCATTAGCA GATGCATCTA TGCAGTATGA AAAAGTAAAA
GGCGCACTAT TACCGCCATT GGGTGAAATA AGACCAATAA GTAAATCAAT CGCTTATGCA
GTTGCCAAAC AAGCAATTGC CGATGGGTTG GCTTTGCCTG TGTCTGAAGA AACCATGCAG
CGCCGATTAG TTGATAATTT CTGGGCACCT AAATACAGAA CCTATAGACG CACCTCTTTT
TAG
 
Protein sequence
MTFQRPLYIP FAGPALLESP LLNKGSAFSQ EERNNFNLTG LLPHNIETIE SQSTRAYQQL 
SSFKSDLDKH IYLRNIQDTN ETLFHHLIEN HLEEVMPLIY TPTVGLACEQ FSKIYRRKRG
LFVSYPERHK IDDMLQNATK QNVKVIVVTD GERILGLGDQ GIGGMGIPIG KLALYTACGG
ISPAYCLPIV LDVGTNNSQL LADPMYMGWR NPRITGEEYN EFVDLFIQAV KRRWPEVLLQ
FEDFAQTNAT PLLNKYRDQI CCFNDDIQGT AAVSVGTLIA ACQNKGEKLS DQRIAFLGSG
SAGCGIAQHI VRQMQREGLT QEQARQRVFM VDRYGLLTDQ MTNLQAFQQP LIQYTKDLSH
WDISSHIGLE QVIKQGNISV LFGVSGQPGL FTQEVVESLC ANVDHPIVLP LSNPTSRVEA
TPKDITTWSH GQAIVATGSP FPPTLYENEY IEVSQCNNSY IFPGIGLGVL AARATAISDN
MLMAASQALA DASMQYEKVK GALLPPLGEI RPISKSIAYA VAKQAIADGL ALPVSEETMQ
RRLVDNFWAP KYRTYRRTSF