Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0537 |
Symbol | |
ID | 4623724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 686245 |
End bp | 687927 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639795733 |
Product | malate dehydrogenase |
Protein accession | YP_941990 |
Protein GI | 119944310 |
COG category | [C] Energy production and conversion |
COG ID | [COG0281] Malic enzyme |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACATTTC AACGACCTTT ATATATCCCC TTTGCCGGTC CGGCATTATT AGAAAGCCCT TTACTTAATA AAGGCAGCGC TTTTTCCCAG GAAGAAAGGA ACAACTTCAA CTTAACCGGC CTGCTGCCAC ATAATATCGA AACCATTGAA TCGCAATCGA CGAGAGCCTA TCAACAGCTT AGTTCATTTA AATCTGATTT AGATAAACAT ATCTACCTGC GAAATATCCA GGATACTAAT GAGACCTTAT TTCATCATCT GATAGAAAAT CATCTCGAAG AAGTTATGCC GCTTATTTAT ACACCAACGG TCGGGCTTGC TTGTGAGCAA TTTTCTAAAA TATACCGGCG TAAAAGAGGA TTGTTTGTTT CCTACCCTGA GCGTCATAAA ATTGATGATA TGTTACAAAA TGCCACCAAA CAAAACGTAA AAGTCATTGT AGTGACCGAT GGTGAGCGCA TATTGGGGTT AGGCGATCAG GGCATAGGCG GCATGGGCAT TCCAATAGGT AAACTCGCTT TATATACTGC CTGCGGAGGT ATCAGTCCCG CTTATTGTTT GCCAATCGTA CTGGATGTTG GTACAAATAA CAGTCAGTTA CTGGCAGATC CTATGTATAT GGGCTGGCGT AATCCCCGTA TTACGGGCGA AGAATATAAT GAATTTGTAG ATCTCTTTAT TCAGGCGGTC AAACGCCGCT GGCCTGAGGT ACTACTGCAG TTTGAAGATT TTGCACAGAC TAATGCAACT CCTCTATTAA ATAAATACCG CGATCAGATA TGCTGCTTTA ATGACGATAT TCAAGGTACT GCAGCCGTTT CCGTCGGTAC ACTTATTGCG GCTTGCCAGA ATAAAGGTGA AAAACTCAGT GATCAGCGTA TTGCTTTCCT GGGGTCGGGA TCTGCGGGTT GCGGTATTGC CCAGCACATC GTAAGACAAA TGCAGCGTGA AGGTTTGACC CAAGAGCAGG CACGCCAGCG AGTATTCATG GTTGACCGTT ATGGCCTGTT AACTGATCAA ATGACCAACC TGCAGGCGTT TCAACAGCCT CTGATACAAT ATACAAAGGA TCTTAGTCAC TGGGATATAA GCTCCCATAT TGGACTAGAG CAGGTCATCA AACAGGGCAA TATCAGCGTA TTATTTGGTG TAAGTGGTCA ACCTGGCCTA TTTACTCAAG AGGTTGTTGA AAGTTTGTGT GCTAACGTTG ATCATCCGAT TGTATTGCCT TTATCAAATC CCACCTCAAG GGTTGAAGCC ACTCCAAAGG ATATAACCAC CTGGAGTCAT GGTCAGGCGA TTGTTGCAAC CGGCAGTCCA TTTCCGCCCA CTTTATATGA AAATGAGTAT ATTGAAGTAT CCCAGTGTAA CAATAGTTAC ATATTCCCAG GGATCGGGCT GGGGGTCTTA GCGGCGCGGG CGACGGCAAT TAGCGATAAT ATGTTAATGG CCGCCAGTCA GGCATTAGCA GATGCATCTA TGCAGTATGA AAAAGTAAAA GGCGCACTAT TACCGCCATT GGGTGAAATA AGACCAATAA GTAAATCAAT CGCTTATGCA GTTGCCAAAC AAGCAATTGC CGATGGGTTG GCTTTGCCTG TGTCTGAAGA AACCATGCAG CGCCGATTAG TTGATAATTT CTGGGCACCT AAATACAGAA CCTATAGACG CACCTCTTTT TAG
|
Protein sequence | MTFQRPLYIP FAGPALLESP LLNKGSAFSQ EERNNFNLTG LLPHNIETIE SQSTRAYQQL SSFKSDLDKH IYLRNIQDTN ETLFHHLIEN HLEEVMPLIY TPTVGLACEQ FSKIYRRKRG LFVSYPERHK IDDMLQNATK QNVKVIVVTD GERILGLGDQ GIGGMGIPIG KLALYTACGG ISPAYCLPIV LDVGTNNSQL LADPMYMGWR NPRITGEEYN EFVDLFIQAV KRRWPEVLLQ FEDFAQTNAT PLLNKYRDQI CCFNDDIQGT AAVSVGTLIA ACQNKGEKLS DQRIAFLGSG SAGCGIAQHI VRQMQREGLT QEQARQRVFM VDRYGLLTDQ MTNLQAFQQP LIQYTKDLSH WDISSHIGLE QVIKQGNISV LFGVSGQPGL FTQEVVESLC ANVDHPIVLP LSNPTSRVEA TPKDITTWSH GQAIVATGSP FPPTLYENEY IEVSQCNNSY IFPGIGLGVL AARATAISDN MLMAASQALA DASMQYEKVK GALLPPLGEI RPISKSIAYA VAKQAIADGL ALPVSEETMQ RRLVDNFWAP KYRTYRRTSF
|
| |