Gene Ping_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0524 
Symbol 
ID4624836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp668382 
End bp669377 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content39% 
IMG OID639795720 
Productoctaprenyl-diphosphate synthase 
Protein accessionYP_941977 
Protein GI119944297 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTT GGACTTTTAG GACCATGGAT ATAAAAACAA TTCAGCGTAT TTCTGCAACT 
GAAATGAATC AGGTCAATAA ACTGATCACG GAACAATTAA GCTCGGATGT CGCCTTAATT
AATCAACTGG GTTTTTATAT TATTAATAGC GGTGGTAAAC GTATCCGCCC GTTAATTACC
GTATTAGCAG CAAAAGCCCT GGGTATTCAT GATCAAAATA CGACCAAACT TGCCGCGATA
ATTGAATTTA TTCATACGGC AACCTTGCTG CACGATGATG TCGTTGATGA CTCAGATCTG
CGCCGCGGCA AAAAAACAGC GAATGCGGTA TTTGGTTCAG CAGCAAGCGT ATTAGTCGGG
GATTTTTTAT ATACCCGCTC TTTTCAGATG ATGACGCAGT TGCGTAATTT AAAAGTGATG
GATATTTTAT CTTCAGCAAC CAATATTATT GCTGAAGGTG AAGTTTTACA GTTAATGAAT
TGTAATGATC CGGACACCAC TGAAAAAAAA TATATGGATA TTATCTACTT TAAAACTGCC
AAACTATTTG AAGCGGCAAC ACAACTTGTC GCCGTATTAG GAGAGCAATC TGAGGAAATT
GAAACAGCTT TACTCAATTA TGGTAAATAC CTTGGGACGG CATTCCAGTT AACCGATGAT
GTGATGGATT ATAACTCTGA CGCAAGCGAA ATGGGTAAAA ATACAGGAGA TGACCTGGCA
GAAGGCAAAC CGACCTTACC GCTTTTATAT GCGATTCAAC ACGGCAATAA AAAGCAAGCA
ACGCTTATCA AAGAGGCCAT TAAAAAAGGT AATGGCATGG ATCATTTTGA TGAGATTATG
CAGGCACTGC ATGATACAAA TGCATTAGAA TATGCAAAAA AACGCGCACT TGAAGAAGCA
GATAAAGCCA TTAAAGCTCT TGTTATTATT CCAGACAGTG AATACAAACA AGCATTAATA
AGCTTGGCTC ATATTGCTGC AGATCGAAAA TCTTAA
 
Protein sequence
MAIWTFRTMD IKTIQRISAT EMNQVNKLIT EQLSSDVALI NQLGFYIINS GGKRIRPLIT 
VLAAKALGIH DQNTTKLAAI IEFIHTATLL HDDVVDDSDL RRGKKTANAV FGSAASVLVG
DFLYTRSFQM MTQLRNLKVM DILSSATNII AEGEVLQLMN CNDPDTTEKK YMDIIYFKTA
KLFEAATQLV AVLGEQSEEI ETALLNYGKY LGTAFQLTDD VMDYNSDASE MGKNTGDDLA
EGKPTLPLLY AIQHGNKKQA TLIKEAIKKG NGMDHFDEIM QALHDTNALE YAKKRALEEA
DKAIKALVII PDSEYKQALI SLAHIAADRK S