| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0495 |
|---|
| Symbol | |
|---|
| ID | 4623401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 630552 |
|---|
| End bp | 631271 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639795691 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_941949 |
|---|
| Protein GI | 119944269 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000290412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.693329 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAG AGAAAATGAT ACGACAGGTT GTGTTAGACA CAGAGACAAC GGGTATGAAT
AAAGGTGGCA CAATTTATGT CGGTCATCGG ATCATCGAAA TTGGTTGTGT TGAAGTTATT
AATCGACGTT TAACCGGCCG CCATTTCCAT GTTTATGTCA AACCGGATCG TGAAATAGAC
CCCGAAGCGA TAGCAGTTCA TGGTATTACC GATGAATTTT TACACGATAA ACCCGCATTT
AGCGACATTG CAGATGAATT CATAGAATTT ATCAAAGGGG CCGAATTAGT TATCCATAAC
GCACCCTTTG ACGTCGGTTT TATGGATCAG GAGTTTCGTT TTTTAAATAA AAGAACAAAA
CCAACCGCTG AAATATCGAC CATCACAGAT ACATTAGTCA TGGCAAGAAA AATGTACCCC
GGCAAACGCG CAAGCCTTGA TGCTCTGTGC AGGGAACTGG GTATTGATAA TAAGCACCGT
GTTCTGCATG GCGCTTTATT AGATGCGGAA ATATTGGCGG ATGTTTATCT GCTTATGACC
GGAGGGCAAA AAAAACTTAA CCTCTCAAGC TCTGGACAAA ATGACACTAA TACTGGAAAA
CGCGTAAGAA AAACACAATC GCCACTCACT ATTATTAGCG CCAGCGAAGA TGAACAGCAA
GCACATGAAA AACGCTTAGA TCTCATTGAA AAGTCAGCCA GCTGCCTATG GCGGGAATAA
|
|---|
| Protein sequence | MNTEKMIRQV VLDTETTGMN KGGTIYVGHR IIEIGCVEVI NRRLTGRHFH VYVKPDREID
PEAIAVHGIT DEFLHDKPAF SDIADEFIEF IKGAELVIHN APFDVGFMDQ EFRFLNKRTK
PTAEISTITD TLVMARKMYP GKRASLDALC RELGIDNKHR VLHGALLDAE ILADVYLLMT
GGQKKLNLSS SGQNDTNTGK RVRKTQSPLT IISASEDEQQ AHEKRLDLIE KSASCLWRE
|
|---|
| |