Gene Ping_0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0492 
Symbol 
ID4626872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp625231 
End bp626892 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content42% 
IMG OID639795684 
Productglutaminyl-tRNA synthetase 
Protein accessionYP_941947 
Protein GI119944267 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00440] glutaminyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0995744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.607402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGG TTGATACTGC GCCAAGCAAT TTTATTCGTA ACATCATCGA TTCGGATCTA 
CAAAGTGGTA AGCATCAGGT GATACATACA CGCTTTCCGC CGGAACCGAA TGGTTATTTG
CATATAGGTC ATGCTAAATC TATCTGTTTA AATTTTGGAC TTGCAGAAGA CTACCCCAAT
GCACTTTGCA ATCTGCGTTT TGATGATACT AATCCAGTAA AAGAAGATGC GGATTATGTT
GCCGCTATTG AAAAGGATGT GCGTTGGTTG GGGTTTAAAT GGGCGGGTGA TATACATTAT
TCATCTGACT ATTTTGAACA GTTGTATGAC TTTGCCATTG AGTTAATTAA AAAAGATAAA
GCTTATGTTT GTGCTCTCGA CGCACAACAA ACTCGAGAAT ATCGAGGTTC GTTAATGACA
GTGGGTAAAG ACAGCCCCTT TAGAAATCGC CCTATTTCAG AAAGTTTAGA TCTTTTTGCG
CGTATGCGTG CGGGTGAGTT TGCGGAAGGC TCGATGATGC TGCGGGCAAA AATTGATATG
GCGTCACCAA ATATGAAAAT GCGTGATCCG GTTCTTTATC GCATTCGTTT TGCGCATCAT
CATCAAACGG GTGATAAATG GTGTATCTAT CCAATGTACG ATTTTACCCA TTGTATTTCA
GATGCGCTTG AAGGCATAAC CCATAGCCTG TGTACACTTG AATTTGAAGA TCACCGCCCT
TTATATGATT GGGTATTAGC CAATATCAGT ATTGCCTGTA AACCACGTCA AATTGAGTTT
TCCCGTCTTA ATTTACAATA TACTTTAACC TCTAAACGTA AACTACATAC GTTAATTGAA
GAGAAGATTA TAAGTGCTTG GGATGATCCG CGGATGCCGA CTATTTCCGG TATGCGCCGC
CGTGGTTATC CGGCCGCCTC TATTCGTGAA TTTTGTAAAC GTATTGGTGT GACTAAACAG
GAAAATACCG TTGAACTGGC CTCGTTAGAA GCTTGTGTTC GTGAAAATCT TGAAGCTAAT
GCGCCTCGCG CAATGGCTGT GATTGATCCT GTTAAAGTGA TTATTAGCAA TTATGACGAA
AATAAAACAG AAAAATTAAT CGCGGCTATA CACCCTAAAG ATGAAAGCAT GGGGACAAGA
ACAGTCACTT TCTCACGAGA AATTTTTATT GACCGTGCTG ATTTTAGAGA AGAGGCGAAT
AAAAAATATA AACGTTTAGT CTTGGGTAAA GAAGTGCGTT TACGTAATGC TTATGTGATT
AAAGCTGATC AGGTCATTAA GAATGATGCC GGCGAAATTA CTGAAATTCA CTGCTCTTAC
GATCCTGAAA CGCTGGGCAA CAATCCAACG GACGGGCGTA AAGTGAAAGG CGTGATCCAT
TGGGTTAGTG CGGTTGAAAA CCAAGCAGCA GAGTTTCGAA TCTATGAGCC TTTGTTTCTG
GTTGAAAATC CTGCTGCCGC AGAAAATATC GACGAAGTAC TCAATCCAAA CGCTTTAGTG
ATAAAACACG GTTTTGTGGA GTCAGGTCTT AGTGATGCGC TAGCAGAAAA AGCTTATCAA
TTCGAGCGTG AAGGTTACTT CTGTGCCGAT AATAAGGATT CATCACCCGA ACGGCTGGTT
TTTAACCGTA CCGTTGCGTT GCGTGACTCT TGGGGCGGAT AG
 
Protein sequence
MTQVDTAPSN FIRNIIDSDL QSGKHQVIHT RFPPEPNGYL HIGHAKSICL NFGLAEDYPN 
ALCNLRFDDT NPVKEDADYV AAIEKDVRWL GFKWAGDIHY SSDYFEQLYD FAIELIKKDK
AYVCALDAQQ TREYRGSLMT VGKDSPFRNR PISESLDLFA RMRAGEFAEG SMMLRAKIDM
ASPNMKMRDP VLYRIRFAHH HQTGDKWCIY PMYDFTHCIS DALEGITHSL CTLEFEDHRP
LYDWVLANIS IACKPRQIEF SRLNLQYTLT SKRKLHTLIE EKIISAWDDP RMPTISGMRR
RGYPAASIRE FCKRIGVTKQ ENTVELASLE ACVRENLEAN APRAMAVIDP VKVIISNYDE
NKTEKLIAAI HPKDESMGTR TVTFSREIFI DRADFREEAN KKYKRLVLGK EVRLRNAYVI
KADQVIKNDA GEITEIHCSY DPETLGNNPT DGRKVKGVIH WVSAVENQAA EFRIYEPLFL
VENPAAAENI DEVLNPNALV IKHGFVESGL SDALAEKAYQ FEREGYFCAD NKDSSPERLV
FNRTVALRDS WGG