| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0478 |
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| Symbol | |
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| ID | 4626858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 605080 |
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| End bp | 605484 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639795671 |
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| Product | prepilin peptidase dependent protein D |
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| Protein accession | YP_941934 |
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| Protein GI | 119944254 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.183909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.878303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAAAAA TACAACAGGG TTTTACATTA ATCGAGCTGT TAATCGTTAT CGCGATTATC
GGTATTCTGG CAGCTGTTGC GTTGCCGGCC TATAATACTT ATACGCAAAA AGCGAAATAC
ACCGAAGTGG TTTTGGCGAC AGCCGGGTAT AAAACGGCCA TTGAAACCTG TGCACAAACG
GAAGGATCTG TTGGTGCCTG TGATACTATA CTTAAGATAG GAATGCCGAC TTTTGTTGCT
TATGGAGAAG TGGCTAGTAT GGCGATAACA GCAGCAACGG CTGTGATCAC TGCAACAGGG
ACAGCAGCAG TTGGTAGTTA TACCTATATT TTAACGCCAA CATATGCGAA TGGTCGTGTT
ACTTGGGTGG CGACGGGAAC TTGTTTTGCC AATGGTGTTT GTTAA
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| Protein sequence | MKKIQQGFTL IELLIVIAII GILAAVALPA YNTYTQKAKY TEVVLATAGY KTAIETCAQT
EGSVGACDTI LKIGMPTFVA YGEVASMAIT AATAVITATG TAAVGSYTYI LTPTYANGRV
TWVATGTCFA NGVC
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